| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4498 |
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| Symbol | uvrD |
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| ID | 6118854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5440868 |
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| End bp | 5443033 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641636060 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001762844 |
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| Protein GI | 170728818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0025295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAT CTTCTTTACT TGACGGCCTG AATGATAAAC AACGTGAAGC CGTTGGTGCA
CCGCAATCCA GTATGTTGGT GTTGGCGGGT GCTGGCAGTG GTAAGACTCG GGTATTAACC
CATAGAATTG CCTGGCTGAT GCAGGTTGAA CAGCAAAGTC CATACTCTAT TTTGGCGGTA
ACCTTTACCA ACAAAGCTGC CGCTGAGATG CGTGAGCGTG TGGAGAAGGT GAGCGGTAGT
AATATGGGAC GCATGTGGAT CGGTACCTTC CACGGTTTAG CTCATCGTCT GCTGCGTACT
CATTATCAAG ATGCCAATCT GCCCCAGACA TTTCAGATCA TCGATTCTGA CGATCAGTTA
AGACTGATTA AACGCATTCT TAAAAGCTTG AACTTAGATG AGAAGCAGTA TCCGCCTCGT
CAGGCTCAGG GCTATATCAA TGGTAAGAAA GATCAAGGTT TAAGACCTAA GCATATCGAT
GCGGGTGGCT TCCCGATTGA GCAGACGCTG CTGCAAATCT ATCAGGTTTA TCAGGAGTCT
TGCGATCGCG CAGGGCTGGT GGACTTTGCT GAAATTTTAC TGCGTGCCCA CGAGCTTTGG
CTCAATAAGC CCCATGTGCT TAAGCATTAT CAAGACAGAT TTAAAAATAT CTTAGTGGAC
GAGTTCCAAG ATACTAACGC CATTCAATAT GCGTGGATCC GCGTGCTAGC GGGTGACAAT
GCCAACGTAA TGATAGTCGG TGATGATGAT CAGTCTATCT ACGGCTGGCG TGGTGCTCAG
GTGGAGAACT TGCATAAGTT CTTAGAGGAC TTCCCCAAGG CGGGCACTAT ACGTTTGGAG
CAGAACTACC GCTCTACAGG CCATATTCTT AAGGCGTCGA ATGAGCTGAT TGCTAATAAC
CCAGAGCGGT TAGGTAAGAA GCTGTGGACC GAAGATAAAG ATGGCGAGCA GATCGCTATC
TACTGCGCCT TTAATGAGAT GGATGAGGCG AGATTTATCG TCGGCCGTAT CTGTGATTGG
CATGATATGG GCGGTGACTT AAGTAGCTGT GCAATCCTCT ACCGTTCCAA CGCGCAGTCA
CGAGTACTAG AAGAAGCATT ACTGCATAAA GGCTTAGCTT ACCGTATTTA CGGTGGCCTT
CGCTTCTTCG AACGCCAAGA GATTAAAGAT GCGATGAGCT ATCTGCGTCT GATTAATAAT
AAAGATGATG ATGCGGCATT CGAGCGTGTG GTCAATACGC CAGCCCGTGG TATCGGTGGT
CGAACCTTAG ATATCCTGCG TGCTACCGCT CGTCAGCAAG AGCTCACCTT GTGGCAAACC
TGTTTGCGTG CACTGGAGGA GAAACTGCTG AGCGGACGTG CGGCCAATGC GGTTCGTGGC
TTTATGGATC TGATTGTTGA GATGCAGCAA GACACTGAAG AGTTGAGTTT ACATCGAACC
ACAGATCATG TGATCAGAGA GTCTGGTCTT AAGAGCATGT ATGAGGCTGA AAAAGGCGAG
AAAGCACGCT CACGTGTTGA AAACCTCGAC GAGTTAGTGA CAGCTGCGCG TACTTTCGTT
ATGCCGGAAG AGAATGAAGA TATGGGTGAG CTGAATGCTT TCCTATCCCA TGCGGCATTA
GAGGCCGGTG AAGGACAAGC TGATGCCTTT ACTGATGCGG TGCAGTTAAT GACGCTGCAC
TCGGCAAAAG GTCTGGAGTT CCCAGTGGTA TTTATGTCTG GCGTTGAGGA GGGGATCTTC
CCGAGCCAGA TGGCAATGGA TGAGGGTGAC AGACTCGATG AGGAGCGTCG TCTCTGTTAC
GTGGGCATGA CCCGCGCGAT GGAGAAACTG TATATCACCT ATGCGGAAAC ACGCCGTATC
TATGGTCGTG AAAACTTTGC TAGACCGTCA CGCTTTATCA AGGAGATCCC CACTGAACAT
GTGGAAGAGA TCCGCTTGAA AACCCAAGTG AGCACGCCTT CTCGCGCTCA GCCTTCATTT
ACCCGCTCAA CTGTTGTGAA TGAGTCGGGC TTTCAGATTG GACAAGGTGT GATGCACCCT
AAATTTGGTG AAGGTAAGGT GACCAGTACT GAGGGAAGTG GTCCGCAAGC TAGAGTTCAG
GTGAACTTTT TCGATGTGGG CAGCAAGTGG CTGGTGGTGG CTTATGCAAG GCTTGAAACC
TGCTAG
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| Protein sequence | MDVSSLLDGL NDKQREAVGA PQSSMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVSGS NMGRMWIGTF HGLAHRLLRT HYQDANLPQT FQIIDSDDQL
RLIKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AGGFPIEQTL LQIYQVYQES
CDRAGLVDFA EILLRAHELW LNKPHVLKHY QDRFKNILVD EFQDTNAIQY AWIRVLAGDN
ANVMIVGDDD QSIYGWRGAQ VENLHKFLED FPKAGTIRLE QNYRSTGHIL KASNELIANN
PERLGKKLWT EDKDGEQIAI YCAFNEMDEA RFIVGRICDW HDMGGDLSSC AILYRSNAQS
RVLEEALLHK GLAYRIYGGL RFFERQEIKD AMSYLRLINN KDDDAAFERV VNTPARGIGG
RTLDILRATA RQQELTLWQT CLRALEEKLL SGRAANAVRG FMDLIVEMQQ DTEELSLHRT
TDHVIRESGL KSMYEAEKGE KARSRVENLD ELVTAARTFV MPEENEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFPVV FMSGVEEGIF PSQMAMDEGD RLDEERRLCY
VGMTRAMEKL YITYAETRRI YGRENFARPS RFIKEIPTEH VEEIRLKTQV STPSRAQPSF
TRSTVVNESG FQIGQGVMHP KFGEGKVTST EGSGPQARVQ VNFFDVGSKW LVVAYARLET
C
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