| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4497 |
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| Symbol | ubiA |
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| ID | 6118853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5439914 |
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| End bp | 5440774 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636059 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001762843 |
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| Protein GI | 170728817 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial
[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0633254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.801833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGA AGGATAAATT AGAGATCTAC TTACGTTTGG CCCGCATGGA CCGTCCAATC
GGTACCTTAT TGCTGATGTG GCCCTGCTTG ATGGCGCTAG TGTTAGCGGC CGGTGGCATG
CCTGATCTTA AGGTTTTAGT GATCTTTATT ATCGGCGTAG TCGTGATGCG AGCTTGTGGC
TGCATTATTA ATGATTACGC AGATCGTAAA CTCGACTCCC ATGTTGAGCG GACTAAATCT
CGCCCTTTGG CCAGTGGTGA GGTCTCTGTT AAAGAGGCTT TAACCCTCTT TGTGGTGATG
GGACTTATCG CTTTCGGTCT AGTTTTAATG CTCAACCCTT TAGTGGTGCA GCTCTCCTTT
GTGGGGATCA TACTCACCAT CATCTATCCC TTTACTAAAC GCTTTACCAA TATGCCGCAG
ATGTTTCTCG GTGTGGTGTG GAGCTGGTCG ATCCCCATGG CCTATGCGGC GCAAACAGGG
ACCGTACCAG CGGAAGCTTG GTGGTTATTT GCGGCTAATT GGTGCTGGAC TGTCGCTTAC
GACACCATGT ATGCCATGGT CGACAGAGAT GATGACCTTA AGGTGGGAAT AAAATCCACC
GCCATTTTAT TTGGTAAGTA TGACCGTCAA GTTATCGCCC TGTTTCAGCT GGCTGCACTT
GCCTGTTTCA TTATTGCTGG TTGGGCTGCC GATCGTGGCT TAGTTTACGC CTTAGGTATT
ATCACTTTTG TTGGTTTTAG TCTCTATCAA CAGAAGCTTA TTTATGGGCG AGAACGTGCT
CCCTGCTTTA AAGCTTTTCT GAATAATAAC TGGGCGGGAT TGAGCTTGTT TGTTGCCCTT
GGTGTTGATT ATCTTGTCTA G
|
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| Protein sequence | MSVKDKLEIY LRLARMDRPI GTLLLMWPCL MALVLAAGGM PDLKVLVIFI IGVVVMRACG
CIINDYADRK LDSHVERTKS RPLASGEVSV KEALTLFVVM GLIAFGLVLM LNPLVVQLSF
VGIILTIIYP FTKRFTNMPQ MFLGVVWSWS IPMAYAAQTG TVPAEAWWLF AANWCWTVAY
DTMYAMVDRD DDLKVGIKST AILFGKYDRQ VIALFQLAAL ACFIIAGWAA DRGLVYALGI
ITFVGFSLYQ QKLIYGRERA PCFKAFLNNN WAGLSLFVAL GVDYLV
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