Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4497 |
Symbol | ubiA |
ID | 6118853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5439914 |
End bp | 5440774 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636059 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | YP_001762843 |
Protein GI | 170728817 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0633254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.801833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA AGGATAAATT AGAGATCTAC TTACGTTTGG CCCGCATGGA CCGTCCAATC GGTACCTTAT TGCTGATGTG GCCCTGCTTG ATGGCGCTAG TGTTAGCGGC CGGTGGCATG CCTGATCTTA AGGTTTTAGT GATCTTTATT ATCGGCGTAG TCGTGATGCG AGCTTGTGGC TGCATTATTA ATGATTACGC AGATCGTAAA CTCGACTCCC ATGTTGAGCG GACTAAATCT CGCCCTTTGG CCAGTGGTGA GGTCTCTGTT AAAGAGGCTT TAACCCTCTT TGTGGTGATG GGACTTATCG CTTTCGGTCT AGTTTTAATG CTCAACCCTT TAGTGGTGCA GCTCTCCTTT GTGGGGATCA TACTCACCAT CATCTATCCC TTTACTAAAC GCTTTACCAA TATGCCGCAG ATGTTTCTCG GTGTGGTGTG GAGCTGGTCG ATCCCCATGG CCTATGCGGC GCAAACAGGG ACCGTACCAG CGGAAGCTTG GTGGTTATTT GCGGCTAATT GGTGCTGGAC TGTCGCTTAC GACACCATGT ATGCCATGGT CGACAGAGAT GATGACCTTA AGGTGGGAAT AAAATCCACC GCCATTTTAT TTGGTAAGTA TGACCGTCAA GTTATCGCCC TGTTTCAGCT GGCTGCACTT GCCTGTTTCA TTATTGCTGG TTGGGCTGCC GATCGTGGCT TAGTTTACGC CTTAGGTATT ATCACTTTTG TTGGTTTTAG TCTCTATCAA CAGAAGCTTA TTTATGGGCG AGAACGTGCT CCCTGCTTTA AAGCTTTTCT GAATAATAAC TGGGCGGGAT TGAGCTTGTT TGTTGCCCTT GGTGTTGATT ATCTTGTCTA G
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Protein sequence | MSVKDKLEIY LRLARMDRPI GTLLLMWPCL MALVLAAGGM PDLKVLVIFI IGVVVMRACG CIINDYADRK LDSHVERTKS RPLASGEVSV KEALTLFVVM GLIAFGLVLM LNPLVVQLSF VGIILTIIYP FTKRFTNMPQ MFLGVVWSWS IPMAYAAQTG TVPAEAWWLF AANWCWTVAY DTMYAMVDRD DDLKVGIKST AILFGKYDRQ VIALFQLAAL ACFIIAGWAA DRGLVYALGI ITFVGFSLYQ QKLIYGRERA PCFKAFLNNN WAGLSLFVAL GVDYLV
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