Gene Swoo_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4496 
Symbol 
ID6118852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5438659 
End bp5439762 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID641636058 
Producthypothetical protein 
Protein accessionYP_001762842 
Protein GI170728816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.871513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGTA GCGTAAAGTT CAGACTTATC TTTCTAATCA GCGCCATAGT GAGTTACTCC 
CTCGGCTTTC AGTTTCTGCC TGAGAGCTTA GATGGCGATC TGAATCTGAG GCTGGTTATT
GGCTTTTCAG TACTCTATTT TATCTTGCTG CCACTCAGTT ATTGGTTTTG TATCATTAAA
GTTGGTGAGC AGAAGCTTTG GAAGATGTTG CTCATATTTA GCCTGAGTAG TTTAATCGCA
AGGCTGAGTT TCCCTGCTGA AATCGCGGGC TATTTTGAGT TTATTGCCTG GCTACGTTAC
CCGATTATTG CTGTGTTATT GGCTATTCAG TTGTTCTTGA TGGTGAGTAT CGTAAAGGGG
TTATGGCAAG CGCGAAACCT GTCTGGCGAT CCTAGGGTCC ATATTTTAGA GACCTTTCAA
GAGCAAGATG ATAAGAAACG TTCTCTGGCA TTAGTTATGG CCTCGGAGCC TGCGAGCTGG
TATTACGCCA TCCCTTACCT ATCACGCAAC CATATCCCAG CCATCACGTC TCTAAAGCTA
CGTTCGAGCT CTCTGTGGTG TTGGTTCCTG CTAATTTTAG GGACTCTGGC TACCGCATCG
CTAGCTTATT TTGTTATTGA GCCTTGGAGT CAGCTAGCCG CTATTATAGT CGCCAGTATT
ATTAGCTATA GCCTAGTGAT GGTAACGGCA AACTATAGGC TCTCCAGACA CTATTCACTC
TACTGCCAGC ACGAGAATCT AATTATTAAC AATAGTGTAT GGGGCTTTAT GTCGATTAAA
TTAACCGACA TCGCTGATAT TGAAATCGGT GAGTACTCTA GGAAGGAGAA TAAAGAGGGG
CTGCATTTTG GCTACGGCGC TAGCAGCAAT ATCAAGTTGA ACTTTAAGCA ACCACAGACC
TATTTTGGCG GTTTAGGCCA GCTTACTGAG CAGGTCGATA GCATCGATAT GCACCTTGTA
GATCCTCAAG CATTGGTTGA ATATTTCCAG CAATATATAG CCAATCAGTC AGGCGTGCCT
CTACCGACCG ATGGCGCAAC GACACAGGAG CTCCAAACTT GCGATAGCCC AGCAATATCG
GCAGAGCTTA GTTCAGGTTC TTAA
 
Protein sequence
MRRSVKFRLI FLISAIVSYS LGFQFLPESL DGDLNLRLVI GFSVLYFILL PLSYWFCIIK 
VGEQKLWKML LIFSLSSLIA RLSFPAEIAG YFEFIAWLRY PIIAVLLAIQ LFLMVSIVKG
LWQARNLSGD PRVHILETFQ EQDDKKRSLA LVMASEPASW YYAIPYLSRN HIPAITSLKL
RSSSLWCWFL LILGTLATAS LAYFVIEPWS QLAAIIVASI ISYSLVMVTA NYRLSRHYSL
YCQHENLIIN NSVWGFMSIK LTDIADIEIG EYSRKENKEG LHFGYGASSN IKLNFKQPQT
YFGGLGQLTE QVDSIDMHLV DPQALVEYFQ QYIANQSGVP LPTDGATTQE LQTCDSPAIS
AELSSGS