Gene Swoo_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4479 
Symbol 
ID6118835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5417427 
End bp5417876 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID641636041 
Productcytochrome C biogenesis protein 
Protein accessionYP_001762825 
Protein GI170728799 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGAG CCATCCTAAA TATGAGCAAA CTAAGCGTTT GGTTAACAGT CATTTTACTG 
TTTAGTACCA GCCTAACGGC GAGTGCTGTG ACAGATAAAA TCGATTACAC CCATGATCAG
ATCCGTGACC TAGGTTTTGA AATAGCTCAT GAGCTGCGCT GTCCCATGTC GGTAAATCAA
AACCTGTTTG ACTCAGGTGC CCCAATTGCC AGCGAGCTTA AGGGGCAGAT TTTTCTGATG
TTGGAACAGG GCGAATCTAA GCAGGCTATC ATTGACTTTT TGGTACAGCG TTACGGCGAA
AAAATCAGAT ATCAACCTAG CTTATCTATG GCAACTGCTG CGCTTTGGTT TGGCCCAATT
CTTTTGCTTT TCGGCATTAT CGGTTTTGCA GCCCTATTGA TCCGAGAACA GCGTAAACAT
CAAGACACTA ATGGTAATAC CTATGAATAA
 
Protein sequence
MNRAILNMSK LSVWLTVILL FSTSLTASAV TDKIDYTHDQ IRDLGFEIAH ELRCPMSVNQ 
NLFDSGAPIA SELKGQIFLM LEQGESKQAI IDFLVQRYGE KIRYQPSLSM ATAALWFGPI
LLLFGIIGFA ALLIREQRKH QDTNGNTYE