Gene Swoo_4474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4474 
Symbol 
ID6118830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5410772 
End bp5411491 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content37% 
IMG OID641636036 
Producthypothetical protein 
Protein accessionYP_001762820 
Protein GI170728794 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT TGCTTATTAG TATCTCAATT ATCCTATTGC TTTCGTTAGG CTGGATCCTT 
TGTCATCACC TTATGTATGG CGATGATCTA GCTGAGCTCG AAAAGGAGGT TGGGCATTTC
TTTGGCTCTA ATATTAATAT CGAATCTAAA AACGTTGAAA AAAATAACAG TTACCACCTT
GGAGTAATTG GCTTATTTTT TATCTGTGCT TCTGTCTCAC TTTATTTACT CATTGGGAGT
TATCAATATT TAGATTCAGC TAAAGTTGAT TACAACATTG ATTATCTTTT GGTCGCAGAC
ATTAATAAAG GTCAAAAGCT AGCCGAAGAA AACCCTGGTG ATCCACTAGT GTTATTAGGG
CTTGCCCAGT CATATATCGA TGGCGGCATG TATAAGGATG CGCTCGGAAT CTTAGAACAA
CTGCTTACAA TCGACAGCGA AAACGCACAA GCCTTGGGGC TTAAAGCAAC ATCCATGTAT
TACCGTGATG ATCGTGTTAT CACCATGGAC ACCTCTTTAG TGATTGCGAG GGCGCTAACT
CTACATCATG AAGAACTTAA TACTCGATTA TTAATTGCTA ATGATGCTTA CCTTAAAGGT
AATTATCAAA AGGCGATTAA TAACTGGAAT ATTGTTTTAA CCAATAAAGT CCAATCCTTT
AATCGTGACG CTATCTATTT TGCAATTGAT AAGTCTAAGA AAAAACTAAT CCCAAGTTAA
 
Protein sequence
MNTLLISISI ILLLSLGWIL CHHLMYGDDL AELEKEVGHF FGSNINIESK NVEKNNSYHL 
GVIGLFFICA SVSLYLLIGS YQYLDSAKVD YNIDYLLVAD INKGQKLAEE NPGDPLVLLG
LAQSYIDGGM YKDALGILEQ LLTIDSENAQ ALGLKATSMY YRDDRVITMD TSLVIARALT
LHHEELNTRL LIANDAYLKG NYQKAINNWN IVLTNKVQSF NRDAIYFAID KSKKKLIPS