Gene Swoo_4465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4465 
Symbol 
ID6118821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5400958 
End bp5401935 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content44% 
IMG OID641636027 
Producthypothetical protein 
Protein accessionYP_001762811 
Protein GI170728785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTC CCAGAAGAAC CCAGATCAGT ATTGAAGACA CTCCCTATTA CCATGCATGG 
AGTAGAACAG TTCGTCGCGC CTTCCTAACG GGAGTTGATG ATTATACTGG GAAATCTTAC
GAACATAGGC GTGAATGGAT AGAAGAACAG ATACTCAGTC TTGCTGATAT TTTTGCAATA
GATGTAGCAG CCTACGCGGT GATGAGTAAC CATTTGCATC TGGTATTGAG GATTGATATT
GAGTCAGCGA ACAATTGGAG TGACAGAGAG GTTGTTGAGC AGTGGCACCG ATGCTTTAAC
GGCACAGGGT TGAGCCAAAA GTTTGTAAAA GGTGAAGTGA TAGAAGAGTA TCAAGTGGCT
AAATTAAAAC ACCTTATTGC CACTTACCGC TCAAGATTGT GTGATATCAG TTGGTTTATG
CGGTGCCTTA ATGAGCCGAT AGCAAGAAAA GCCAATATCG AAGATAATTG CACAGGCCAT
TTCTGGGAAG GACGATTTAA GAGTCAAGCC TTGCTTGATG AAGCGGCGGT GCTGGCCTGT
ATGGCCTATG TTGAACTCAA CCCTATTCGA GCCAAAATGG TTGATACACT TGAGAATTCA
GACCACACCA GTATACAACT TAGAGTTAAT GCTGCGTTGA AAGGAGAGCA ACCCAGTAAG
CTACTCCCTT TTATTGGAGA TGAGCGGCTC AATCAGCCCA AGGGAATAAA CTTCGCACTG
AAGGATTACC TAGAGTTAGT TGATGAAACC GGTAGAATTA TCCGTGATGA CAAGAGAGGT
TCTATCTCTG CTAAGAGCAC AAAGATACTG ATGAAGTTGA ATATTTCATC AGACAACTGG
ATAAAACTGA CCTCAGAGTT TGGCGAACTG TTTCACGGCC CAGTAGGGGA AACACAATCG
TTAACTCGCT ATTGTGAGCA TCTTCAAAAA CGTCGACGGC ACTTCTCAAA AAGCTGCCAG
CACTTTCAAG CAGATTAA
 
Protein sequence
MPRPRRTQIS IEDTPYYHAW SRTVRRAFLT GVDDYTGKSY EHRREWIEEQ ILSLADIFAI 
DVAAYAVMSN HLHLVLRIDI ESANNWSDRE VVEQWHRCFN GTGLSQKFVK GEVIEEYQVA
KLKHLIATYR SRLCDISWFM RCLNEPIARK ANIEDNCTGH FWEGRFKSQA LLDEAAVLAC
MAYVELNPIR AKMVDTLENS DHTSIQLRVN AALKGEQPSK LLPFIGDERL NQPKGINFAL
KDYLELVDET GRIIRDDKRG SISAKSTKIL MKLNISSDNW IKLTSEFGEL FHGPVGETQS
LTRYCEHLQK RRRHFSKSCQ HFQAD