| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4454 |
|---|
| Symbol | |
|---|
| ID | 6118810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5390502 |
|---|
| End bp | 5391293 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641636017 |
|---|
| Product | peptidylprolyl isomerase FKBP-type |
|---|
| Protein accession | YP_001762801 |
|---|
| Protein GI | 170728775 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TTAAGAGAAA TACCTTAGCC GTTATGACCA GCGTATCACT GCTTATCTCT
GCAAATGCTA TGGCGAACAC AGAGATCAGC TCAGATGTTC AAAAAGAGTC TTACAGCATA
GGTGCCTCAC TGGGTAAATA TATCTCTGGC CAGATCTATA GCCAGACCGA ACTCGGCGCT
GAGGTTGATG TTGAGCTGGT GATTGAAGGC GTTGTCGATG CCCTTAAAAA CAAACCTCAG
TTTTCAGATG AAGAGATCTT AACTTTCCTT AACCAGCGTG CCGAGCAGCT CAATACGGCA
AGAGAAGCTG CGGAGGCCAA GATTGCGTTG GAAAACCTTA CCGCTGGTAA TAAGTACCTT
ACCGAAAACA AAGCAAAAGA TGGTGTTAAC GAGACAGCTT CAGGTCTGCA GTATGAGGTT
ATCTCTGAAG GTGAAGGGCG TAAGCCAAAT CCACAGGATG TGGTTACCGT GCACTACAAA
GGTTTCTTAG TCGACGGTAC ACCATTTGAT GACTCTTATG AGCGTAACGA GCCAAACCGC
TTTGCTTTAA TGAGTGTGAT TGAGGGTTGG CAAGAGGGGA TCCCCTTGAT GAATGAGGGC
TCTAAGTACA AGTTTGCTAT CCCAGCAGCA CTTGCCTATG GCGAGAAGCA AGTTGGCATT
ATCCCGCCGA GCTCAACATT GGTGTTTGAA GTGGAGCTAG TAAAAGTTGA AGCCCCAGGT
GAAGGCGCAC ATGGCATGGG ACTAAGTGGT ATGGGAATGG GCGGCATGAT GGGACAGGGT
AATCCTCATT AA
|
|---|
| Protein sequence | MKTFKRNTLA VMTSVSLLIS ANAMANTEIS SDVQKESYSI GASLGKYISG QIYSQTELGA
EVDVELVIEG VVDALKNKPQ FSDEEILTFL NQRAEQLNTA REAAEAKIAL ENLTAGNKYL
TENKAKDGVN ETASGLQYEV ISEGEGRKPN PQDVVTVHYK GFLVDGTPFD DSYERNEPNR
FALMSVIEGW QEGIPLMNEG SKYKFAIPAA LAYGEKQVGI IPPSSTLVFE VELVKVEAPG
EGAHGMGLSG MGMGGMMGQG NPH
|
|---|
| |