Gene Swoo_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4452 
Symbol 
ID6118808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5388963 
End bp5389685 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID641636015 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001762799 
Protein GI170728773 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG CTGTGAGTGA AAATATAGAG AGACGGAGGT TCCTTAAGTG CTTAGGAGCC 
AGCTCTTTGA TACTAGCCCC CTTAGGGTGT AGCTCGGTCA AAGAGGGGGA GTCAGATGCA
AACAAGCCCC ATTACGCTAT GGTGTTTGAC CAAAATAAAT GTACTGGCTG TGGTGAGTGT
AAGGAGGCCT GTAACCTTGC CAATAACTTG CCTGAGGGTA AGTCGAGACT CTTGATGGAG
CAGCACTCTG GCGGATTGGA AGGTCAGTCT TGTCCACATT GCGGCAAAAC CACTGAGTGT
GGTTGTGAGC GTAAGTTTGT TCGCGTGTCA TGTCAGCAGT GTAAGAATGC TCCTTGTGTC
ACCGTTTGCC CAACAGGCGC GGCCCACAGA GATGAGAAGA CAGGCATTGT GACCATGGAC
GCGGCTAAGT GTGCAGGTTG TAAGTACTGT ATTGCGGCTT GTCCATATGA TGCGCGTTTT
ATCAATAAAG AAACCGATGT CGCCGACAAC TGTGATTTCT GTTTAAACAG TAAACTTGCC
ATCGGCGAGC TTCCTGCTTG TGTGCAGAAA TGTCGTTACG ATGCACTGAT TTTTGGTGAT
ATTAACGATC CGACATCCTA TATCAGTAAG CTACTGCGAG TAAAAGATTC TGTGCGTATT
AAGCCTGGAT TTGGTACTGA GCCGAGCTTA CGTTACATAC CAATTGTTAA GCTGGGAGTA
TAG
 
Protein sequence
MEDAVSENIE RRRFLKCLGA SSLILAPLGC SSVKEGESDA NKPHYAMVFD QNKCTGCGEC 
KEACNLANNL PEGKSRLLME QHSGGLEGQS CPHCGKTTEC GCERKFVRVS CQQCKNAPCV
TVCPTGAAHR DEKTGIVTMD AAKCAGCKYC IAACPYDARF INKETDVADN CDFCLNSKLA
IGELPACVQK CRYDALIFGD INDPTSYISK LLRVKDSVRI KPGFGTEPSL RYIPIVKLGV