| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4447 |
|---|
| Symbol | |
|---|
| ID | 6118803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5384207 |
|---|
| End bp | 5385055 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641636010 |
|---|
| Product | copper ABC transporter, permease protein |
|---|
| Protein accession | YP_001762794 |
|---|
| Protein GI | 170728768 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACA TGTTAGCTAT GACTTCACTT AATTCACCTG TGTTTATTAT CGCTGCCAAG
GAGATTAAGG ACAGCTTTCG AAACCGCTGG ATAAGCTTTA TTTCACTTAT TTTTATTGTC
TTATCCTTAA GCATTACATT TGCTGGTAGC GCAATAACTG GCACCTTGGC ACTTCCCACG
TTGCCAAACC TAATGACGAG TCTGTCGACC GTGTCTGTAT TTATTATCCC CTTGGCGGCC
ATTTTGCTCA GTTATGACGC TTTTGTGGGA GAGGATGAAG CGGGAACTTT GCTGTTGCTG
CTCTCCTATC CGCTGACACG ATTTCAGATC ATCTTAGGTA AGCTGCTAGG CCACGGTGTT
GTCATGTTCG TGAGTATCTC TTTTGCTTTT GGCGGCACTG GCATATTGCT GTTGCTGTTG
GGGGAGACTT ATTCAGTCAT GGAGACCTTA CTGGTATTTA TGCAATTCAT CTTAAGTAGT
TTCCTACTTG CACTTACTTT TATCTTGGTA GGGTATACGG TGAGCCTGCG CGCCACAGAG
AAGGCCAGAG CAGTGGGCAG TTTACTCTTT ATCTGGTTTC TGTTTGTGCT GCTTTATGAC
TTGCTTCTGT TGGCTGTGCT GGTGGCCGAG CTTAGCGTCA TTAATCAAAG TGTGTTAAAT
CTGTTGATCG CTCTGAATCC TACGGATCTA TACCGAGCAG TGAATGAGAT GGCGATCGAT
TCGAGAGAGG GGTTATCACT GCTTAATGGA ACCTCTTGGG CGTTAGAGGG GTTATATGCT
TCTATGCTTG TGTGGATCTG TATATTGATG GCAGTATCTT ATCAGCTGTT TAGACGCAAA
AGCTTATAA
|
|---|
| Protein sequence | MHNMLAMTSL NSPVFIIAAK EIKDSFRNRW ISFISLIFIV LSLSITFAGS AITGTLALPT
LPNLMTSLST VSVFIIPLAA ILLSYDAFVG EDEAGTLLLL LSYPLTRFQI ILGKLLGHGV
VMFVSISFAF GGTGILLLLL GETYSVMETL LVFMQFILSS FLLALTFILV GYTVSLRATE
KARAVGSLLF IWFLFVLLYD LLLLAVLVAE LSVINQSVLN LLIALNPTDL YRAVNEMAID
SREGLSLLNG TSWALEGLYA SMLVWICILM AVSYQLFRRK SL
|
|---|
| |