Gene Swoo_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4442 
Symbol 
ID6118798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5377997 
End bp5378971 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content44% 
IMG OID641636005 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_001762789 
Protein GI170728763 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT TAAAGAAATC GGAAATTCTG ACTGAAAGTG GAACCAATGA ACTTGAAATT 
ATTGAGTTTC ATCTACATAA GACATTAGCG GGAGGTGGGC ATAAAGTCTG CCATTATGGG
ATCAATGTGG CCAAGGTTCG TGAGGTTATC AGAGTGCCTG ATACGTCAGA TTATCCAAAT
GCGCAATCCC ATATGGTGGG GGTCTTCTCT CTGCGGGATA ACCTTATTCC TTTAGTGGAT
CTTGCTGGAT GGCTTGGGAT CCCGACTCAA AACGATTTAG AGCACAAAGT TGTAATAGTG
ACCGATTTTA ATCGAATGAT TAATGGTTTC TTAATTGACA GTGTTCGCAG TATTCATCGT
GTTTCATGGG AGCAGGTTGA GTCTCCCAGC CAATTTTTGG AAGCGGGGGA GCAGGACTGC
GTTGTTGCAG TGGTTCGCCG TGAAGGACAC CTTATCATGG TGCTGGATTT TGAAAAGATC
ATCGCTGATA TCAATCCTGA ACTGAGCATG GATAAATATG ATGTGACCCT TGATAAGACT
GTGGTGATTA ATGACGAGAT GCTAGCTAAG CGTGAGGCTA AAACCATACT GATCGTCGAT
GACTCAGCCT TTATTCGTAA GATGATAGAA AATACCCTTC GAACAGCAGG CTATAACATT
ATCACCGCCA AAGATGGTGG TGATGCGTTG GAGATGTTGG AGGAGTTTGA GCGACTCGCA
GAGGAAGCTG GTGCCTCAGT CAGTGAGATG GTGAGTGGGA TTATTTCGGA TGTGGAGATG
CCAAGAATGG ATGGATTACA TCTGCTTAAG CGTCTCAGAG ACAAGCCGTC CTATAAGACT
ATGCCGATTG TTATGTTCTC ATCACTGATG AGTGAAGATA ACCGAGGAAA AGCGTTGGCC
TTAGGAGCCA ATGACACAAT CACTAAGCCG GAAATTGGCC GCATGGTTAC TATGGTCGAT
AGCTTTGTTC TTTAG
 
Protein sequence
MSELKKSEIL TESGTNELEI IEFHLHKTLA GGGHKVCHYG INVAKVREVI RVPDTSDYPN 
AQSHMVGVFS LRDNLIPLVD LAGWLGIPTQ NDLEHKVVIV TDFNRMINGF LIDSVRSIHR
VSWEQVESPS QFLEAGEQDC VVAVVRREGH LIMVLDFEKI IADINPELSM DKYDVTLDKT
VVINDEMLAK REAKTILIVD DSAFIRKMIE NTLRTAGYNI ITAKDGGDAL EMLEEFERLA
EEAGASVSEM VSGIISDVEM PRMDGLHLLK RLRDKPSYKT MPIVMFSSLM SEDNRGKALA
LGANDTITKP EIGRMVTMVD SFVL