Gene Swoo_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4439 
Symbol 
ID6118795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5374262 
End bp5374789 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content43% 
IMG OID641636002 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001762786 
Protein GI170728760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAG TAATCACTGA AACAGACCGT CTTATCATAC GAGAATTTAA CCTCGATGAT 
GCAAGCGCAG TTTATCATTT TAATGCACCT AAAGAGGTCA ACCGCTTCAC TGGTGATGCA
GGAATGTGTG AGAACATTAA AGATGCAGAG CAGATCATCC GCAATATCTG GTTAGTGGAG
TATCAGAAGT TTGGCTTTGG TCGTTGGGCG GTGGTGTTAA AAGAGAGCGA TGAGGTCATC
GGCTTTTGCG GCTTCAAAAA TGAAACCCGT ATTAACGCTG TTGATATCGG CTATCGCTTT
CACCCTGACT ACTGGGGCAA AGGCTTTGCC ACGGAATCAA ATTTAGCTTG TATCGATTAT
GCGAAAAAGC ATATGAAGCT GGACCGAGTC CTCGGGGATG TGGTTGTTGA AAATCTAGAC
TCTATCAAGG TACTGAAAAA GTTAGGCATG AATTACATCG GTCAATACCA AGAGGAAGGA
TTTACCCTTA ATCGGTATGA ACTCCTATTA AAGGGGAAAA CTGAATGA
 
Protein sequence
MSRVITETDR LIIREFNLDD ASAVYHFNAP KEVNRFTGDA GMCENIKDAE QIIRNIWLVE 
YQKFGFGRWA VVLKESDEVI GFCGFKNETR INAVDIGYRF HPDYWGKGFA TESNLACIDY
AKKHMKLDRV LGDVVVENLD SIKVLKKLGM NYIGQYQEEG FTLNRYELLL KGKTE