| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4429 |
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| Symbol | |
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| ID | 6118784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5365925 |
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| End bp | 5366449 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635991 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001762776 |
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| Protein GI | 170728750 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.570217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACAA TCGTATCAGT TCGCCGTAAC AATCAGGTCG TTATCGCTGG AGATGGCCAA
GTTTCACTTG GTAACACAGT GATGAAAGGT AACGCAAAAA AAGTTCGCCG CCTTTATCAT
AATAAAGTCT TAGCTGGTTT TGCCGGCGGC ACCGCCGATG CCTTCACCCT GTTTGAACGC
TTCGAAGCCA AATTAGAGAT GCATCAAGGA CACTTGATGA AAGCCGCTGT TGAGATGGCG
AAAGATTGGC GTAGCGACAA GATGCTTCGC AAGTTAGAAG CACTACTGGC TGTTGCCGAT
GACACCTGCT CATTAATCAT TACAGGTAAC GGTGATGTTG TTCAGCCCGA AAACGACCTT
ATCGCTATCG GATCTGGTGG CAACTTTGCC CAATCTGCTG CAACGGCTCT ACTTGAAAAT
ACTGAACTAA CGGCCTTAGA GATAGCTGAA AAATCGCTAA CTATTGCTGG TGATATCTGC
GTGTTCACCA ACCAGTTCAA AACCATCGAA GAATTAAATT ATTAA
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| Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NAKKVRRLYH NKVLAGFAGG TADAFTLFER
FEAKLEMHQG HLMKAAVEMA KDWRSDKMLR KLEALLAVAD DTCSLIITGN GDVVQPENDL
IAIGSGGNFA QSAATALLEN TELTALEIAE KSLTIAGDIC VFTNQFKTIE ELNY
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