| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4419 |
|---|
| Symbol | |
|---|
| ID | 6118774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5353216 |
|---|
| End bp | 5353872 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641635981 |
|---|
| Product | MSHA biogenesis protein MshJ |
|---|
| Protein accession | YP_001762766 |
|---|
| Protein GI | 170728740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA AGCTAGAGGA GGTTGCCGCA CGTTTTGACC TGTTGAGTCA ACGTGAACGT
GTCATGGTGG CTAGTGCTGC GTTAATTGTG ATCGGTTTAC TTTGCTATAT GCCGCTGGAA
TCTTTGTTAC TCAAACAGAG TAAATTAACT CAGCAAAATA AAGGCATTTC CGCAGAAAAC
CAAGTGTCGA TGCAGCAGAT TGCGCTTTAT AACCAGCGGT TAGCTCAAGA TCCTAATGAT
GAATATAGCG CACGTTTTGC AACATTAGAG CAGCAAAGCA CAGAGTTGGA TAAGCAGCTC
TCTTTTCAGA TGGTAGACAT GGTGCCTGCT GATCATATGC CCGCTTTATT GAGTCAACTG
CTTGAGAAAG TCAGAGGAAT AAAGTTACAA AACTTTCAAT CTATTGCGCC AACTCCTTTG
CTGGCTGTAG GTGAAGAGAA GAAGATGAAC CTGTACAGCC ATGGTCTCCG TTTGACTTTT
CAAGGGGATT ATTTTGCTGT TCTTAAGTTT GTAGAGGCCA TTGAAGCGAT GCCAAACAAG
TTGTATTGGA AGCGTATGGA GTATCAGGTT GATGAATACC CTATGGCAGA TGTCGTTTTA
GAGCTATATA CCTTAAGTAT TAATAAGGAC TTTATCAGTG TTTCAAGTCA AGGTTAA
|
|---|
| Protein sequence | MKQKLEEVAA RFDLLSQRER VMVASAALIV IGLLCYMPLE SLLLKQSKLT QQNKGISAEN
QVSMQQIALY NQRLAQDPND EYSARFATLE QQSTELDKQL SFQMVDMVPA DHMPALLSQL
LEKVRGIKLQ NFQSIAPTPL LAVGEEKKMN LYSHGLRLTF QGDYFAVLKF VEAIEAMPNK
LYWKRMEYQV DEYPMADVVL ELYTLSINKD FISVSSQG
|
|---|
| |