| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4416 |
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| Symbol | |
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| ID | 6118771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5350298 |
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| End bp | 5351206 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635978 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_001762763 |
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| Protein GI | 170728737 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.620402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTACCAGC AGCACTTTGG GTTAGCGGAG ACTCCTTTCT CCCTGACCCC TAATACACAG
TTCTTTTTTG GCCTTGCGCC TCATGTTGAG GCGCTGCAAG TGTTGCAGAT GGCATTACAA
ACCGGTGAAG GGTTTATTAA AGTCACTGGT GAAGTTGGTA CCGGTAAAAC CCTTATCTGC
CGCAAACTTA TTAATGAGCT ACCTAAGCGA TTTCATTGCG CATATCTGCC TAACCCCTAT
CTTTCACCTG CGGAGCTCAG GTGGGCCGTA GCTTTAGAGT TAGGCCTTAA ATATTCGGCC
AGCATTGATC AGATGCAGCT TACGGGACTG ATACAGCAGC AGTTATTAGC GCTATCAGCC
CATGGACACT CTATTGTGCT TGTACTCGAT GAGGCGCAGG CACTACCTGA CGAAAGCCTT
GAGGCTTTGC GACTATTCAC CAATTTAGAG ACTGAGAGTC GTAAGTTGCT ACAAGTGGTT
TTGTTTGCTC AGCCAGAGCT CGATGATCGT CTTAATTTGC ATAATTTTAG GCAGTTAAGA
CAGAGGATCA CCTTTAGTTA CAAGCTAAGA GCCTTATCGG TAGATGAGGC CTGTGCTTAT
GTGCAACATA GATTATCGGT AGCGGGCCGT GTCGGCGAGC CACTGTTTAT TGAAAAAGAT
ATTCGGGCAT TGGCGCAGGC AGCCAGAGGG ATCCCAAGAT TGATTAATAT ATTAGCTCAC
AAATCATTGC TATTAAGCTT TGGTGAAGGG GCAGAGCGTG TAAAACGCCA ACATGTCAAA
GCGGCCATCA CAGATACTCA AGATGCGAAT GTTACAGGTC AGAATCGATG GTTTTGGTTT
ATGGGTCTTG GTGTTACCTC ATTACTAGCT GGTTTAGGCA TTCACCTCTT TTGGGGAGCG
GCTTCATGA
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| Protein sequence | MYQQHFGLAE TPFSLTPNTQ FFFGLAPHVE ALQVLQMALQ TGEGFIKVTG EVGTGKTLIC
RKLINELPKR FHCAYLPNPY LSPAELRWAV ALELGLKYSA SIDQMQLTGL IQQQLLALSA
HGHSIVLVLD EAQALPDESL EALRLFTNLE TESRKLLQVV LFAQPELDDR LNLHNFRQLR
QRITFSYKLR ALSVDEACAY VQHRLSVAGR VGEPLFIEKD IRALAQAARG IPRLINILAH
KSLLLSFGEG AERVKRQHVK AAITDTQDAN VTGQNRWFWF MGLGVTSLLA GLGIHLFWGA
AS
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