| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4411 |
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| Symbol | |
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| ID | 6118766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5344795 |
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| End bp | 5345454 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635973 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001762758 |
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| Protein GI | 170728732 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000316241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAGC TGAGAAAGGG TTATATGAAA AGCCACATGG GTAGAGTGCA ACAAGGTTTT
TCTTTAATCG AACTTGTTAT CGTGATTGTG ATTTTAGGCT TATTGGCAGC CACAGCGATC
CCTCGTTTTT TAAATGTGAC TGATGATGCA GAAGATGCAA GTGTTGATGG TGTGTCGGGT
GGTTTAGCCA CGGCTGTTGG CTTTGTTCGG GCGCAATGGG AAGTTGATGG ACGCCGAAAT
GACTCTGTTA TCTTAGACGG GACTACAGCA TACCTAGATG AAAGGTTTGG TTTTCCTACG
GGATCACCTG CATCAGGGAC CGGTAATACC GATGCTACAA CTATGACCAA TGCAACATGC
CAAGAGGTAT TTAGCGCTGT ATTACAAAAT GCACCACGTA ATGTGCAGAT AGATCAAGAT
GCGCGTAAAC AGAGATATGT CGTAAGTGTT ATTGACAGTA TTGGTGGCAC TGGTACCGCG
ATATCGGGTG TGCAGGTTCC TGGTTTAGAT GTGTGTGTCT ATCACTTAGT CGCTTCGCTT
AGGTTAGATC CAACAACAGG CGTTGCTAAC CCTCAGCCAA ACCTGACTAC AGCTGGGGCT
AAGGGAGTAA CTTACAACCC TGGAACGGGC CAAGTGGTTA GTTTCTCGAA CGATCTGTAA
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| Protein sequence | MTKLRKGYMK SHMGRVQQGF SLIELVIVIV ILGLLAATAI PRFLNVTDDA EDASVDGVSG
GLATAVGFVR AQWEVDGRRN DSVILDGTTA YLDERFGFPT GSPASGTGNT DATTMTNATC
QEVFSAVLQN APRNVQIDQD ARKQRYVVSV IDSIGGTGTA ISGVQVPGLD VCVYHLVASL
RLDPTTGVAN PQPNLTTAGA KGVTYNPGTG QVVSFSNDL
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