| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4410 |
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| Symbol | |
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| ID | 6118765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5344034 |
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| End bp | 5344561 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635972 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001762757 |
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| Protein GI | 170728731 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000246782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGC AAAATGGTTT TACCCTAATT GAGTTAGTGG TCGTTATCAT TATTTTAGGT
ATTCTTGCTG TAACAGCGGC ACCTAAATTT ATCAATCTAC AGTCAGATGC ACGTGCTTCG
ACCGTAGATG GTGTTAAGGC GGCTCTTCAG GGCGCAAATA CACTTATCTA TTCTAAAGCT
GCTATAGCAG GCAAAGAGGC AGATGCTGGT GCAAGTATTA CTGTCGCTAC TGGAGTTGTA
GTCACTACCG ATTATGGAAA CATTAATAGT TCTGTTACTG TAGCTACTGT GAAATCTAAT
TTAGAGAATG CTATGGATAT GACTTTTGAA GCATTATCCG ACGGAACTGC TGATATTGCT
ACTGAGGACT GGGCAGTTTG GAGTAGTGCT ACAACTGGTT TTGTTATTGT TCCTAAAGGA
AAGAAAGCTG ATGATGCTTG TCGCCTTAAC TATACGGTCG CGACAAAAAA TACCACTACA
GGCGTTATTA CGCCTGCTCA AATCTCTACT ACAACAACGG ATTGCTAA
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| Protein sequence | MNKQNGFTLI ELVVVIIILG ILAVTAAPKF INLQSDARAS TVDGVKAALQ GANTLIYSKA
AIAGKEADAG ASITVATGVV VTTDYGNINS SVTVATVKSN LENAMDMTFE ALSDGTADIA
TEDWAVWSSA TTGFVIVPKG KKADDACRLN YTVATKNTTT GVITPAQIST TTTDC
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