| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4409 |
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| Symbol | |
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| ID | 6118764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5343528 |
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| End bp | 5344028 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635971 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001762756 |
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| Protein GI | 170728730 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000123074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATC AAAAAGGTTT CACTCTCATT GAGTTGGTTG TTGTTATCAT TATCTTGGGT
ATTCTGGCTG TAACGGCTGC GCCTAAGTTC ATTAATTTAC AAAGCGATGC TCGTGCATCG
ACTCTTGATG GTATGAAGGG AGCACTGCAA GGTGCAAATA CTCTACTTTA TTCAAAAGCA
GCGATTCAGG GTAAAGAGAA AGATGCAAAC ACGGCGGATG CCAATAACGT CGATACAACT
GGTGACGGTA CAGCAGACAT TAAAGCGGTA TACGGTTATG TGAAAGCTGA TGCTACCGAG
ATTGCAAAAG TACTAGAAAG TGATGGTTCA GAGTGGACTA TTGTTGCACC AGCAACAGGG
GTTGCATCAA CTGCAGATGT CGAAATCATT ATTCACCCAG CAGATATTAC TCCAAGTGCA
ACTAAGCAAT GCTTTGTTGA GTACACGGGG GCTACAGCTA CAGATTTACC TGTTTATGGT
ACTTTATCTG ACGACTGTTA A
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| Protein sequence | MKNQKGFTLI ELVVVIIILG ILAVTAAPKF INLQSDARAS TLDGMKGALQ GANTLLYSKA
AIQGKEKDAN TADANNVDTT GDGTADIKAV YGYVKADATE IAKVLESDGS EWTIVAPATG
VASTADVEII IHPADITPSA TKQCFVEYTG ATATDLPVYG TLSDDC
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