| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4406 |
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| Symbol | |
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| ID | 6118761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5341554 |
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| End bp | 5342108 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635968 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001762753 |
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| Protein GI | 170728727 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.73799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCTA ACTCTCTTAA CTCTTCAAAC TCTATTAAAG GCTTTACCTT GATTGAGCTG
GTTGTTGGCA TGGTGGTGCT AAGTATCGCG CTGGTTATGC TATCAAGCAT GCTGTTTCCT
CAGGCAGATC GTGCTGCAGA TACGTTACAC CGAGTTAGAT CTGCTGAGCT AGCACACTCT
ATTTTGAATG AGATCTGGGG AAAGCGTTAT GATCAAAATA CCAATGCTAA TGGGGGAGTG
CCAGCTTGTG GTGCAGCTGC CAGAGCAGAT CTAGGTCTGC CTGCCGGATT AGATTGTACT
GACGCGGCTA ATTTAGGCCC CGATACTGGT GAGGTTCGTA ACACATTTAA TGATGTTGAT
GATTACCATG GTCTTAGCGA AACGAGCAAT ATGCTGAACT CTAGTGACAC TTATTTGAGT
CAGTATATAA ACTACCAGCT ATCTGTTGCT GTGACTTATC CGAATGCCGA TAGAAATAGC
AAGTTAGTCA CGATCGATGT GACAACGCCA AGGGGTGAGG TGATAACCTA TAACGCCATT
AGGAGTAATT ACTGA
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| Protein sequence | MAANSLNSSN SIKGFTLIEL VVGMVVLSIA LVMLSSMLFP QADRAADTLH RVRSAELAHS
ILNEIWGKRY DQNTNANGGV PACGAAARAD LGLPAGLDCT DAANLGPDTG EVRNTFNDVD
DYHGLSETSN MLNSSDTYLS QYINYQLSVA VTYPNADRNS KLVTIDVTTP RGEVITYNAI
RSNY
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