| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4397 |
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| Symbol | |
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| ID | 6118752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5326692 |
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| End bp | 5330870 |
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| Gene Length | 4179 bp |
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| Protein Length | 1392 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635959 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762744 |
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| Protein GI | 170728718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.963583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCCA AATTCTGCCC CCGTAAGTTC AGTCGAATTT GTTGGCAAGT TTTAGCCATC
ATATTGGTGC TGTTTGCGCT AGTTGTTAGC CTATTTAGAG GACTTTTGCC TAAACTTGAT
CAGGTGAGGG CGGAGCTCAC TAACTATATA GAATCTGAGT ATCAAGTTCA GGTTGATGTC
GGTGAACTCA CCGCTGAATG GCAAGCATTT GGTCCAGCTC TGACCGTTAA AAAATTGGTG
CTTCCGCCCC AAGATAAGCT TCCCTTCACC TTAGTTGTCG ATGATGTTCA TGTGAAACTC
GATTTTTGGG AGAGCGTGAT CACTACAAGT CCTCAGATTG AGACCGTGAT ATTTGAGGGA
GTTCAGGTTG CACTTGATAT CGACGAATTG AATAAACCTT CCACATCCAG CAGCCAGACT
TCTACCTCAC AAGCGGTCGA TACCGATTGG CTTTATCGCT TGCTCTTGGA GCAGCTAGAA
CACTTTTCGA TACGTGATGC TAGCTTGCAA TTATTAAGTC AGCGTTACGA TTATAGACCC
ATCTATATCA AAGATCTGAG TTGGAAAAAT GATGATCTTA GGCACCAAGG TAAAGGTAAG
CTCTACTTAG ATAAAGCGGC TTCTGAGGTT GAACAGCTGA GTTTACAGCT GGACATTAGA
GGCAATGGTG ATGAGCCTGA AAGCTTAAAA GGAGAGGTTT ATTTGGCTGC GCGCTCTTTG
GATCTTGGAG AGTGGGCCTC AAGACAAGCC GATCCCTATG ATAGTTCAAG TAAGCTAGCA
CTTGAGGGGG TTGTTAATCT TGAGGCGTGG TTTGATATTG CTCAGCGTGG AATAAAGTCG
GCTCAGATTG AGTTTGAGCC TAGTTGGCTT GAGTGGGATC TAAATGGGCA GGAGCAACAC
TTTGAGATCA AAGGTGGACG AATGCTCTGG CGTCCCAGTG AGCATGGCTG GAGCTTCAAT
AGTCAACAAC TTGCCTTTGA AACAGGTAAG CAGCTGTGGC CCGAACTGGA GTTTTCAGCT
CAGAAATGTG GCGAAGCATT GATCGCCTCT GTGAATCGTC TGGATGCCAG CACATTGTTG
CCTCTATTAC CTCTGTTCCC AGGCGTCGAT TTAGCCCTGT TAAATACTTG GCAGTCACTG
GAACCTCAGG GTTACATCAG CAATATAGCG TTTTCACTCG ATGCTGAGCG TGAACCTAAA
CTAGAACTTG ATGTTGAACA GCTTAGCTGG CAACAACAAG GTCAAATTCC AGGCTCCTCT
CCACTCGATA TTCAGTTAGG TTGGCAGCAA GATGCCCTCT ATCTATCTCT GCCTAAGCAG
AAGTATCTGC TGGATTTCGG TTCGGCTTTT GCAACCCCTC TTGCCTTCGA TGGCGAGCCC
TTCGATGTTA AATATGATAT TGGCTCTCAG GCATTAATCA TTCCTCAACT TGAACTGAAT
AATCCAGATA TCTCTGTTGA TGCCTCAGTA AGGTTAGGGT TTGAAGATGT TGCACATCTA
GCCTTATTAG CTGATGTAAA ACTCCATGAT GTTTCACGGG CTTCAAACTA TTTTCCTCTT
CATGGAATGA GCGAAGATCT GGTGGAATAT TTGGATACTG GGTTGGTTGC TGGTAATACT
CAAGATGCTA AAGTGCTATG GCATGGCCCG CTAGCAAACT ACCCCTATTT TGACCATTCA
GGCGTTTTTC AGGCTGACTT TACTATTCAA GATGCTGAGT TTGAGTTTCA GCCAGATTGG
CCCTCGGTGA CCGAATTAAA TCTATCGGCT CTGTTTGAAA ATGCCCGAAT GGATCTCTTG
ATTAACAAAG GAAACTTGCT TGATGTGGTT GTTGATGGTG CTAGTGTGGT TATTCCTGAG
TTAGGCGAGC GCTCTCTGCT TCAGGTAAAG GCTGATTTAA CCACACAAGG TGAGGCTGCG
ACTCAAGTAC TTAATCGCTC CTCTTTGGCC GACTCTGTGG GTTCAACACT CGATGTAGTA
CAGATAAAGG GTGAGGTGAC AGCAGAGCTG GATCTCTCTA TTCCACTCTA TGATGGCGAG
AGTGAGCAGA TCCGTGGATT GGTTAATTTT GACCATACTC CTGTGTATAT CACTGAGCCT
GGTGTCGCAC TGGATGAAGT CACAGGGCAG GTCAGCTTTC TTAATGATGT TGTTAAGGGA
GAGGGGATAG AAGCTAAGTT GTTTCAGCAG CCTGTCTCTT TGAGCTTTGA CACTGAGAGC
TTAGGTAATA ACTATGGCTT AAATCTGGAT CTGTCTGGCA CCTGGCAACT TGCTGAGCTC
CCCGATTATC TGGATAACCC GCTTAAGTCG TTTTACTCGG GAGAGTTAGA GTGGGATGGT
GGAATGACGC TGATTTTCGA TCCCAGTGGC TATCGTATCC AAGCGCAAGT TAATAGTGAG
CTTCTAGGTG TCGGTTTAGA TCTGCCAGCG CCTTTTACTA AAGGTAAAGA TGAGAGCCGT
AAATTAACTG CAGAGTTGAT TGGGGATAAC AAGCAGTCCT CACTGGGGAT TAAGCTGGGT
AAAGAGATGG AGTTCTGGGG CGGCTTCGAT CAGTTATCTG GCGATCAACT CGCTCACTTC
GATCTCCTGT TAGGGCGTCT ATTTAGGCCT GGTGATCAAC TGAAAAAGAA TCAGGGCCAC
CTGCAGCTCT CCATCGCTGA AACTCAGCTA ACGCCTTGGT TGCCAATCAT TCATCAGTTC
ACAGATCCTG TGCAGGTTGA GGTGAGTGAT AATATTGAAG CCGAAGATAT GGGCGAGAAA
GTTAACTTCT TTCCACCTCT TGTTAGTATT GATGGCGAGA TAAAACAGCT AGACCTAATG
GGACAAGCGT TAACTCACCT AACTTTAGAT GCTCAGCCGG TTGAGCATGT ATGGCGCTTT
AAAGCTGAGT CAGATGAGTT TGATGGCCGA GTAGATTTTT ATCCAGACTG GTCGACTCAA
GGGTTGAAAA TTGTTGCCTC TAAATTCCAT ATGGCACCTG TGATTAAGCA GCCCGAAAAC
GCACACTTTA AATCGGACAC TGTGCTGAAA AATCTGCCGC CTTTAGCGGT GGATGTGGAT
GAGTTTAGTT TTTACGGAAA ACCTTTAGGT CACTTAGTGT TGCAAGGGAC GCCACAAGGT
AATAACTATC AGATCCAGAC CCTTTCTTTG ACAACGCCAG AGGTGACACT CAGTGGAAGT
GGAGCTTGGA ATAACAGCGC CGATGAGAAT TTGACTGAGT TCAATGTAAA GCTTAATGCC
ACTCGATTTG ATGACCTCTC GACGATTCTA GGTACAGATC CAGGGCTGAA GAATGCGCCT
GTTGATATTG ATGCCAAGAT ATCATGGCAG GGTGCTCCCT ATGCTTTTGC ATTAGATTCT
CTCAATGGAC AAGTTAATTT TGATTTGGGT AAGGGGCATC TTACTGAAGT CAGTGATAAA
GGCGCGAGAA TATTTTCCCT ATTCAGCCTC GACTCGTTGC TGAGAAAGCT TTCGTTGGAT
TTCTCCGATG TATTTGGCAA GGGTCTCTAT TTCAACTCCT TTACCGGCAC ACTGAATATT
GATAACGGAG TGATTAAAAC CCGAGATACT GAGATGGACG CCGTTGCTGG TAATATGAAG
GTGAGAGGTT ATACGGATCT GACCACCGAA AGTTTAAATT ACGATATTCG CTTCGTTCCT
CAGCTTGCTT CGAGTGTGCC GACAGTGGTA CTGCTGACGA CCGGTGGTTG GACTTTTGGT
TTGGGAGCAT TTGCCCTGAC TAAAGTGCTT GAACCTGTTA TTGAGGTGAT CACTGAGCTT
AGGTTTAGGT TAACCGGTAC TATGTCGGAG CCAAAAATTG AGGAGCTTGA GCGTAAGAGT
AAAGAGATAG AGATCCCTGA ATCGGCGCTA CCAAAAACTG ATAATGCCAC TGAAGGGCAG
ATTGAAAGCT CACTTGAGGC TCCTTTGAAC TCAGATCTGA CTGACCCTTC GCAGATAGAG
CAGGAAAATC CTCAAAAGAG GGTGGACACA CCTGAGCCAC AGAGCCAAGA TAAAGAAGAT
CCGAGCTCGG GCGTAGAATT GTTTGAGCCT AATGTACAAG AGATCCCCAC TTTTAAGGAA
GTACCTAAAA AGGAAGTTAA GGATGCAGAT CAGCCTATTA CAATGTCAAA GCAGCCGGGA
TGTATCGGCG AATCTGGAAT ATATAGAGTC GCAGCTTAA
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| Protein sequence | MSPKFCPRKF SRICWQVLAI ILVLFALVVS LFRGLLPKLD QVRAELTNYI ESEYQVQVDV
GELTAEWQAF GPALTVKKLV LPPQDKLPFT LVVDDVHVKL DFWESVITTS PQIETVIFEG
VQVALDIDEL NKPSTSSSQT STSQAVDTDW LYRLLLEQLE HFSIRDASLQ LLSQRYDYRP
IYIKDLSWKN DDLRHQGKGK LYLDKAASEV EQLSLQLDIR GNGDEPESLK GEVYLAARSL
DLGEWASRQA DPYDSSSKLA LEGVVNLEAW FDIAQRGIKS AQIEFEPSWL EWDLNGQEQH
FEIKGGRMLW RPSEHGWSFN SQQLAFETGK QLWPELEFSA QKCGEALIAS VNRLDASTLL
PLLPLFPGVD LALLNTWQSL EPQGYISNIA FSLDAEREPK LELDVEQLSW QQQGQIPGSS
PLDIQLGWQQ DALYLSLPKQ KYLLDFGSAF ATPLAFDGEP FDVKYDIGSQ ALIIPQLELN
NPDISVDASV RLGFEDVAHL ALLADVKLHD VSRASNYFPL HGMSEDLVEY LDTGLVAGNT
QDAKVLWHGP LANYPYFDHS GVFQADFTIQ DAEFEFQPDW PSVTELNLSA LFENARMDLL
INKGNLLDVV VDGASVVIPE LGERSLLQVK ADLTTQGEAA TQVLNRSSLA DSVGSTLDVV
QIKGEVTAEL DLSIPLYDGE SEQIRGLVNF DHTPVYITEP GVALDEVTGQ VSFLNDVVKG
EGIEAKLFQQ PVSLSFDTES LGNNYGLNLD LSGTWQLAEL PDYLDNPLKS FYSGELEWDG
GMTLIFDPSG YRIQAQVNSE LLGVGLDLPA PFTKGKDESR KLTAELIGDN KQSSLGIKLG
KEMEFWGGFD QLSGDQLAHF DLLLGRLFRP GDQLKKNQGH LQLSIAETQL TPWLPIIHQF
TDPVQVEVSD NIEAEDMGEK VNFFPPLVSI DGEIKQLDLM GQALTHLTLD AQPVEHVWRF
KAESDEFDGR VDFYPDWSTQ GLKIVASKFH MAPVIKQPEN AHFKSDTVLK NLPPLAVDVD
EFSFYGKPLG HLVLQGTPQG NNYQIQTLSL TTPEVTLSGS GAWNNSADEN LTEFNVKLNA
TRFDDLSTIL GTDPGLKNAP VDIDAKISWQ GAPYAFALDS LNGQVNFDLG KGHLTEVSDK
GARIFSLFSL DSLLRKLSLD FSDVFGKGLY FNSFTGTLNI DNGVIKTRDT EMDAVAGNMK
VRGYTDLTTE SLNYDIRFVP QLASSVPTVV LLTTGGWTFG LGAFALTKVL EPVIEVITEL
RFRLTGTMSE PKIEELERKS KEIEIPESAL PKTDNATEGQ IESSLEAPLN SDLTDPSQIE
QENPQKRVDT PEPQSQDKED PSSGVELFEP NVQEIPTFKE VPKKEVKDAD QPITMSKQPG
CIGESGIYRV AA
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