Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4396 |
Symbol | |
ID | 6118751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5325923 |
End bp | 5326657 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635958 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001762743 |
Protein GI | 170728717 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0171854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTTTAC CTGAATGCTG TTTGCTGTTT GGTGGTCATG AGAGCCACCA GCTCGAATAT GCTGGTGAGG CAAGCGCTGA AACGACTGAG TTAAAAACTG CCCTGTCTGA GCTAGCTGCA AGGTATGATA TCTATCTAGT GGCTGGAACA ATTCCTGTAC GTTCAGAGGA TGGACGTGTC TATAGTCGAA CTTACCTTTT TGATAATACG GGTAGTACCT TAGGTGACTA CGATAAGCTA CACCTGTTTG ATGTAGATGT TGCCGATGGA ACCAAACAGT ACCGGGAGAG TGATACCTTT TGTCCAGGCG AGAAGATCAC CGTTATAGAT ACGCCATTTG GAAAGTTAGG TTTAGCGATT TGCTATGATC TTAGATTCCC AGATCTGTTT AGAGCCATGC GTTTGGCTGG GGCTGAGTTG ATTGCTCTGC CTTCCGCTTT TACTAAGGTG ACAGGTGAGG CACATTGGCA ACCACTGATT CAGGCAAGGG CGATAGAGAC CCAATGCTTT ATTCTGGCAG CGGCCCAGTG GGGACAGCAT AATCAAGGCA GTCGTGAGAC CTGGGGACAG AGTATGATTG TCGATCCTTG GGGGCGAGTT CAGGCTGAAA AAAGAGAGGA GTGTGGCTGG GTTCAGGCTA CACTGGACAG GAGCGAGCAG GATAAGATCC GCAAGCATAT CCCTGTAGCT GGTCATAATC GATTTTCAGA GCCCAAGTTA CGAAAAAGCA ATTAG
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Protein sequence | MVLPECCLLF GGHESHQLEY AGEASAETTE LKTALSELAA RYDIYLVAGT IPVRSEDGRV YSRTYLFDNT GSTLGDYDKL HLFDVDVADG TKQYRESDTF CPGEKITVID TPFGKLGLAI CYDLRFPDLF RAMRLAGAEL IALPSAFTKV TGEAHWQPLI QARAIETQCF ILAAAQWGQH NQGSRETWGQ SMIVDPWGRV QAEKREECGW VQATLDRSEQ DKIRKHIPVA GHNRFSEPKL RKSN
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