Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4395 |
Symbol | |
ID | 6118750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5324391 |
End bp | 5325839 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635957 |
Product | peptidase U62 modulator of DNA gyrase |
Protein accession | YP_001762742 |
Protein GI | 170728716 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0700873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTTT TAACCCAAGT TGAGCAAAGT TTATTGCAAG ATGGACAATC ACTGAGTGAT CTACAGGGCT ATCTGAATAT TATTCATCAG CATGATGTCG ACTTTTCCGA TCTTTACTTT CAAGGAAGTC GTCATGAGTC TTGGGTGTTA GAGGATGGAA TCGTTAAAGA GGGCAGCTTT CATATTGAAC GCGGTGTAGG TGTACGAGCA ATCACGGGTG AAAAAACGGG GTTTGCCTAT GCCGATGAGA TCACGCCATC GGCACTTATC GCTTCAGCGG AAGCGGCTCG TAGTATCGCC TCGGCAGGCG CTAATGGCAG TGTTCAAGCT TGGAAAAGCC AAGAGGTGAA ACCACTTTAT CAAAGTGCCG ATCCTATCGC TGCGATGGAA GAGGTTAAGA AGATCGCCCT ACTTAAAGAG GCTGATGCTT ATATCCGTAG CCTCGATAGT CGAATTATTC AGGTGGTTGT TAGTCTTTCT GGTGTTCATG AAGAGATATT AGTGGCAGCA AGCGATGGTA CCCTAGCAGC CGATATTCGT CCTTTAGTGC GTTTTAACTG TAGCGTTATT CTAGAAGATG AAGGTAAGCG TGAACGAGGT GCTAGCGGTG GCGGCGGACG TCATGGCTAT GAAGCATTGA TGGAAACCGA TGATGCTGGT TTACCTAAAT GTTTCTCATC TGCTCGCGAA GCTGTACGAC AGGCTCAAGT TAATCTGACA GCTATTGACG CTCCTGCAGG TCAAATGCCA GTGGTACTTG GCGCTGGTTG GCCAGGTGTC TTGCTGCATG AAGCGGTTGG TCATGGATTA GAGGGAGATT TTAATCGTAA GGGCAGCAGC GCCTTTAGCG GTTTAGTGGG TCAACAGGTG GCGTCTAAAT TAGTCACAGT GGTTGATGAT GGCACGATAG CGAATCGTCG TGGCTCTTTG AGCATTGATG ATGAAGGCGT TGTGAGTCAG AAGACCGTGC TTATCCAAGA TGGGATTTTA AAGGGCTATA TGCAAGATAA ACTCAATGCC CGCCTAATGG GTGAGCAGTC AACGGGTAAT GGTCGTCGTG AATCCTACGC ACACTTACCT ATGCCGCGTA TGACCAATAC CTATATGGAA GCGGGTGAGT CAGATCCAGC AGAGATCATT AAGTCAGTTA AAAATGGTAT CTATGCGCCT AACTTCGGTG GAGGGCAGGT TGATATTACC TCTGGTAAGT TTGTTTTCTC AGCTTCAGAG GCTTACCTGA TTGAAAATGG TGAAGTGACT CAGGCGATTA AGGGGGCGAC TTTAATCGGT AACGGTCCTG AGGCCATGGG AGAGATCTCT ATGGTCGGTA ATGATCTTGC GCTGGATAAT GGCGTGGGTG TTTGCGGTAA AGATGGTCAG AGTGTCCCAG TGGGAGTTGG TCAACCAACG CTGAAATTAG ATAGCTTAAC GGTTGGCGGT ACAGCTTAA
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Protein sequence | MPFLTQVEQS LLQDGQSLSD LQGYLNIIHQ HDVDFSDLYF QGSRHESWVL EDGIVKEGSF HIERGVGVRA ITGEKTGFAY ADEITPSALI ASAEAARSIA SAGANGSVQA WKSQEVKPLY QSADPIAAME EVKKIALLKE ADAYIRSLDS RIIQVVVSLS GVHEEILVAA SDGTLAADIR PLVRFNCSVI LEDEGKRERG ASGGGGRHGY EALMETDDAG LPKCFSSARE AVRQAQVNLT AIDAPAGQMP VVLGAGWPGV LLHEAVGHGL EGDFNRKGSS AFSGLVGQQV ASKLVTVVDD GTIANRRGSL SIDDEGVVSQ KTVLIQDGIL KGYMQDKLNA RLMGEQSTGN GRRESYAHLP MPRMTNTYME AGESDPAEII KSVKNGIYAP NFGGGQVDIT SGKFVFSASE AYLIENGEVT QAIKGATLIG NGPEAMGEIS MVGNDLALDN GVGVCGKDGQ SVPVGVGQPT LKLDSLTVGG TA
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