Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4389 |
Symbol | |
ID | 6118744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5316223 |
End bp | 5316762 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641635951 |
Product | hypothetical protein |
Protein accession | YP_001762736 |
Protein GI | 170728710 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAG TCGGTGATTC AGAACATTTT AAACAGCCCT TTGACCATGA TGAAGATTAT GTCAGCAGAG CGGACGCAAA GCGTGAAATA GCGATTTACC AAGAGCTAGG TATGAAGCTA GTGGCACTCA GTAAAACTCA ACTTAGCAAG TTAGAACTTG ATGAACTTAT ATATGACAAT GTGCTGAAAA CTAAGACGAT AAAAGTAAAC ACTGAGGCAT ATCGTCGCCA TTTGCAGTAT ATAGGTAAGT TAATGCGTAA CGTTGATGTC GAAGCACTAC AGCAAGATAT TAAAAACGTA CTAAACCAAA ATAGCAACGA GAGCGCAAAG CAGAACGTCG CTGAGAAACT AAAAGATCAA CTTATCACTG AAGGTGATGA CGCGGTTCAG GCCTTAGTTG AGAAACACCC TGGACTTGAA AGACAGAAGT TACGCCAACT TATTCGCCAA ACAAAGAAAG AGTTGACGAA AAAGCCTGAG CAAACCTCCA AATCAGCAGT TGAGCTAGTA AAATATTTAC GAACTGAGAT CGCTGAATAA
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Protein sequence | MNIVGDSEHF KQPFDHDEDY VSRADAKREI AIYQELGMKL VALSKTQLSK LELDELIYDN VLKTKTIKVN TEAYRRHLQY IGKLMRNVDV EALQQDIKNV LNQNSNESAK QNVAEKLKDQ LITEGDDAVQ ALVEKHPGLE RQKLRQLIRQ TKKELTKKPE QTSKSAVELV KYLRTEIAE
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