Gene Swoo_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4389 
Symbol 
ID6118744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5316223 
End bp5316762 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content40% 
IMG OID641635951 
Producthypothetical protein 
Protein accessionYP_001762736 
Protein GI170728710 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAG TCGGTGATTC AGAACATTTT AAACAGCCCT TTGACCATGA TGAAGATTAT 
GTCAGCAGAG CGGACGCAAA GCGTGAAATA GCGATTTACC AAGAGCTAGG TATGAAGCTA
GTGGCACTCA GTAAAACTCA ACTTAGCAAG TTAGAACTTG ATGAACTTAT ATATGACAAT
GTGCTGAAAA CTAAGACGAT AAAAGTAAAC ACTGAGGCAT ATCGTCGCCA TTTGCAGTAT
ATAGGTAAGT TAATGCGTAA CGTTGATGTC GAAGCACTAC AGCAAGATAT TAAAAACGTA
CTAAACCAAA ATAGCAACGA GAGCGCAAAG CAGAACGTCG CTGAGAAACT AAAAGATCAA
CTTATCACTG AAGGTGATGA CGCGGTTCAG GCCTTAGTTG AGAAACACCC TGGACTTGAA
AGACAGAAGT TACGCCAACT TATTCGCCAA ACAAAGAAAG AGTTGACGAA AAAGCCTGAG
CAAACCTCCA AATCAGCAGT TGAGCTAGTA AAATATTTAC GAACTGAGAT CGCTGAATAA
 
Protein sequence
MNIVGDSEHF KQPFDHDEDY VSRADAKREI AIYQELGMKL VALSKTQLSK LELDELIYDN 
VLKTKTIKVN TEAYRRHLQY IGKLMRNVDV EALQQDIKNV LNQNSNESAK QNVAEKLKDQ
LITEGDDAVQ ALVEKHPGLE RQKLRQLIRQ TKKELTKKPE QTSKSAVELV KYLRTEIAE