Gene Swoo_4386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4386 
Symbol 
ID6118741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5312782 
End bp5313846 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID641635948 
Productarsenical-resistance protein 
Protein accessionYP_001762733 
Protein GI170728707 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTT TTGAACGTTA TCTCAGTATT TGGGTGGGAT TATCTATTGT AGCTGGCGTG 
CTCTTAGGTA ACCTTTTTCC AACTATATTC GTCACGGTGG CGTCGCTGGA ATATGCCCAT
GTGAACTTGG TGATAGCCCT GCTTATCTGG ATCATGATCT ACCCCATGAT GGTACAGATA
GATTTTGCTG CTGTTAAAGA TGTTAGAAAG AGCCCTAAGG GATTGTGGCT AACATTAGTG
ATTAACTGGT TGGTGAAGCC ATTTACCATG GCCTTTTTAG GTTGGTTGTT TTTCAATGTG
CTCTTTATTG ATTGGGTTGA CCCACAGACG GCAACTGAAT ATATCGCTGG CATGATCTTA
CTGGGGGTTG CTCCATGTAC GGCCATGGTG TTTGTCTGGA GTCAACTAAC CAAGGGCGAC
CCTAATTACA CCTTAGTGCA AGTGTCAGTT AACGATCTCA TCATGGTGGT CGCCTTCGCA
CCTATCTGTG CATTCCTGCT GGGTGTGAGT GATATCGAGG TGCCGTGGGA AACCTTACTC
TCCTCTGTTT TCCTCTATGT AGTGTTGCCA TTAGTGGCGG GAGTGCTTAC TCGTAGACGT
TTAGAGAAAA AGGGGGAGCT TGATTCACTG ACCCAGCTTA TCGCTAAGCT GAAACCTTGG
TCTATGGTTG GCTTGTTGAT GACAGTCGTT CTGCTATTCG GCTTTCAAGC GCAAACAATC
CTTAATGAAC CGCAAAATAT ACTGCTCATT GCTATCCCGC TACTCATCCA GACCTATGGC
ATCTTTTTTA TCGCCTATTA CGCCGCGAAG AGGCTAAAGC TGAGTCATAA GATCGCCGCG
CCTGCGTGCA TGATCGCTAC CTCAAACTTC TTTGAGCTTG CTGTTGCTGT GGCCATCTCA
CTGTTTGGCC TGCACTCCGG TGCTGCGTTG GCGACGGTTG TGGGTGTGTT AGTCGAGGTG
CCTGTGATGT TATCGCTTGT GGCCTTTGTG AATCGTAATC GAGCAAAGTT TGAAAGTGAT
ATTAGCAGTG ATGAGCAGTC TACACCGCTT AGCTCTACTG AGTAG
 
Protein sequence
MGLFERYLSI WVGLSIVAGV LLGNLFPTIF VTVASLEYAH VNLVIALLIW IMIYPMMVQI 
DFAAVKDVRK SPKGLWLTLV INWLVKPFTM AFLGWLFFNV LFIDWVDPQT ATEYIAGMIL
LGVAPCTAMV FVWSQLTKGD PNYTLVQVSV NDLIMVVAFA PICAFLLGVS DIEVPWETLL
SSVFLYVVLP LVAGVLTRRR LEKKGELDSL TQLIAKLKPW SMVGLLMTVV LLFGFQAQTI
LNEPQNILLI AIPLLIQTYG IFFIAYYAAK RLKLSHKIAA PACMIATSNF FELAVAVAIS
LFGLHSGAAL ATVVGVLVEV PVMLSLVAFV NRNRAKFESD ISSDEQSTPL SSTE