Gene Swoo_4378 details

Gene Information

• Locus tag: Swoo_4378
• ID: 6118733
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella woodyi ATCC 51908
• Kingdom: Bacteria
• Replicon accession: NC_010506
• Strand: +
• Start bp: 5301404
• End bp: 5304847
• Gene Length: 3444 bp
• Protein Length: 1147 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641635940
• Product: hypothetical protein
• Protein accession: YP_001762725
• Protein GI: 170728699

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTTCA ACCTACATGA ACAGAGCCAG ACCTCTGGTG AGTTTATTAA TATCGACGAT 
GAGCGATTTT ACGTTATACG CAATACAGAT CTGATGGCTC CCTTTTTCGT GAGTGTTATC 
TCAAATAGCG ATCACTGGTT ATTTGTCTCC TCAACAGGGG GATTAACCGC GGGCAGAGTT 
TCACCAGAAA CAGCTCTTTT TCCTTATATT ACAGTAGATA AAATTCATGA GAGTAACCTG 
CACACAGGTA GCAAAACCTT AATTAAACTG ACCAGTGATG ACAATACTCA TCATTGGGAG 
CCCTTTAATA AAGAACATGA CCATAGATAC CGGTTGACCC GTAATATCTA TAAAAATGTA 
TTAGGCAATA AACTCTGTTT TGAAGAGGTA AATCATGATC TGCAGTTGCA GTTCAGATAC 
ACCTGGCTTA CCAGTGAAAA GTATGGCTTT GTACGTAAAT GTGAGCTAGT GAATCTTTCC 
AATACCACGG TCTGCCTAGA GCTTATTGAT GGACTGCAGA ATATTCTCCC AGCGGGCACA 
CCTAGGTTTA CCCAGACCAA TTCAAGTAAT CTTGTTGATG CGTATAAATG GAGTGAACTC 
GATAAACAAA CACAACTGGC CTACTTTGCC CTTTACTCAG GGATCACCGA CAGAGCTGAA 
CCCTGTGAAT CCCTTAAAGC AAATACGGTT TTTTGCCTTG GATTAGATCA CTATCAGGTG 
CTGCTTTCAA ACGAGCAACT CAGTGAATTT CGCAGCGGTA AATCGATACG TCAGGAAACA 
CATAAACGTG GGATTAGAGG CGCCTATCTA ATCAGTACTC GTATGGTGAT ATCGGCCTTA 
GGCTCCCAGC AATGGCAACT AATTTCTAAT ATAGAGCAGA GCCAAAGCCA GATAGTTAAC 
CTGCGCAATC AACTTAGCAA ACCCGATAAA ATTGAATCAG ACATTGCCGG CAATATTCAC 
TCAGGATCTG ATCAACTCGC CCGTATTATG GGCGCTGCTG ATGCCTTTCA GCACACAGCA 
CAAGAGGATG TGACTGTTCA TCACTACGCC AATGTAGTCT TCAACATATT ACGTGGTGGC 
GCATTTGATG ACCAATACCA AATTTCATTA AGCGACTTCA TCACAACCAT AAGTCTTTTT 
AATCGCGACG TGTTTTTACG CCATCAAGCT CAGCTCAACA CTCTGCAAGA GCCACTGGAT 
TTCACCACCT TACTCTCCTA TATCAAACAG CTTAACGATC CTCAACTTGA GCGCCTTTGC 
TACGAATACC TACCAATCTC ATTTGGTCGG CGACACGGTG ATCCAAGCCG CCCATGGAAC 
CAGTTCGCCA TCAAACTGAT TGATGAAAAC AATAATAAGT TACTGACCTA CCAAGGGAAC 
TGGCGCGATA TTTTCCAAAA CTGGGAAGCC TTAAGCTTTA GCTACCCTGA GTTTATCGAA 
AATGTGATCG CAAAATTTGT CAACGCATCC ACTATGGACG GTTACAACCC TTACCGCATC 
ACCAAAGAGG GAATAGACTG GGAAGTCGAG GAACCAGATG ACCCTTGGAG CTACATAGGT 
TATTGGGGAG ATCATCAAAT AATCTACCTA CAGAAGATGC TTGAGCTTTC TAATCAGTTT 
CATCCAAAAA GATTAAGCGC ACTTCTCTAC CGGGATATCT TTAGCTATGC CAATGTGCCC 
TACCGCATAG GAGCATTTGA AGCATTAGCT AAGGATGCAA AAAGTACCGT CACCTATGAC 
GATGAACTGG CGGCGCTTAT CGAGCATAGA GTCGAAAGCA TGGGCGCAGA TGGTAAATTG 
GTACTCGATA GAGATAATCA GGTCTACCAA GTTAATCTAC TTGAAAAACT CTTAGTACCT 
CTGCTCTGTA AGCTAGGAAA TCTGGTTATT GATGGCGGTC TTTGGCTTAA CACCCAAAGG 
CCTGAATGGA ATGACGCTAA CAATGCCCTT GTCGGTCAGG GACTATCAAT TGTCACTCTT 
TGCTATCTCC GCCGTTATGT AAGCTTCTTA CTGAACTTAC TGGCAAAAGA GACAAAAGCC 
GTATCGCTCT CAACAGAGGT CTGTGACTGG CTCAATGAAA CCGCGACAGC TTTAAGCAAG 
GTTCGCCCTC TTTTAAATGG GACAGAGCTA ACACCTCAGC AAAGATACCA ATCCCTTGCT 
GAACTAGGCA GAGCTGCAAG TGATTACCGT CAATCAGTTT ATCAAGAGCA CCCTTTTTCA 
GGGAAGAAAG AGAGTGATAT CAGTACAATT ACTCAACTAC TTGAAGATGC ACGCCTAGCC 
ATAGATCACA CTATCAATAC CAATAGAACA GAGATAGGTC TCTATAACGC CTATAACTTG 
CTCGACCTGC AGTCTGATGT TGTGAATATC GGCTCTTTGT ACCCCATGTT AGAGGGGCAA 
GTCGCAGCAT TGAGTTCCGG AGTTTTACCC TCAAGTGAAG CTATTAACCT TCTAGAAACG 
CTATTTGAAA GTGATATTTA TCGCGCCGAT CAGCAGAGCT TTATGCTCTA TCCAGATAGA 
GAACTCCCCA GCTTTTTGGA AAAAAATATC ATCCCTAAGC ACTCAGTTAT CGCTTCACCT 
CTATTAAAAG ATATGGTCGA AAAAAGGGAT GAGCGCATCA TAGTACAAGA CAGTGAAGGT 
GTTTTTCGAT TCAACGCAGA ACTAAGCAAT GCCAACGACT TAATACAACA ACTAGAGATT 
ATCTCTACAG AACCAGATTG CCCAATTAAC GCTAACAAAG AGAGCATACT TGAACTCTAT 
GAATCTGTTT TTAATCATAA AGCATTTACC GGACGTTCTG GCGGGATGTT TGGCTTTGAG 
GGGCTAGGTT GCATCTATTG GCATATGGTC TCCAAACTGC TGCTCGCCAC AATGGAAAAC 
TTCTTTACTG CATTGCAGCA AGACGACAAA GAGAGCACAC AGGCGCTAGG CCAACTTTAT 
TACCGTATCA GAGCTGGAAT TGGCTTTAAT AAAAGTCCAG AGGAGTACGG GGCGTTCCCC 
ACAGATCCCT ATTCCCACAC GCCTAAAACA GCAGGCGCTC AACAGCCAGG TATGACAGGT 
CAAGTTAAAG AGGAGATTCT AACTCGGTTT GGTGAGCTAG GTATTCGTGT TAGCCAGGGT 
GAAGTGCACT TCCAACCCAA CCTACTTCGC GCAGCTGAAT TTACTTCGCA AGCGGCAGAA 
TTTACCTATT TAGATGTGAG CAACCAGTGG CAAAAGATTG CGGTTCCCTC ATCTAGCTTA 
AGTTTTACTT GGTGTCAGGT ACCAATTATC TATGTACTCA ATGATGAACT CGCTCCACAG 
ATGTCGATTC TATGGTCCGA CGGTAGAGAG AAAACAATCC CCCACACCAC TCTCTCTTCG 
GATCTGTGTT ACGAACTCTT TATGCGCAAC GGTCATATTC GTCAAATCAA GCTGACACTT 
AACAGCACGC AGCTATTTAA TTAG 

 

Protein sequence

MNFNLHEQSQ TSGEFINIDD ERFYVIRNTD LMAPFFVSVI SNSDHWLFVS STGGLTAGRV 
SPETALFPYI TVDKIHESNL HTGSKTLIKL TSDDNTHHWE PFNKEHDHRY RLTRNIYKNV 
LGNKLCFEEV NHDLQLQFRY TWLTSEKYGF VRKCELVNLS NTTVCLELID GLQNILPAGT 
PRFTQTNSSN LVDAYKWSEL DKQTQLAYFA LYSGITDRAE PCESLKANTV FCLGLDHYQV 
LLSNEQLSEF RSGKSIRQET HKRGIRGAYL ISTRMVISAL GSQQWQLISN IEQSQSQIVN 
LRNQLSKPDK IESDIAGNIH SGSDQLARIM GAADAFQHTA QEDVTVHHYA NVVFNILRGG 
AFDDQYQISL SDFITTISLF NRDVFLRHQA QLNTLQEPLD FTTLLSYIKQ LNDPQLERLC 
YEYLPISFGR RHGDPSRPWN QFAIKLIDEN NNKLLTYQGN WRDIFQNWEA LSFSYPEFIE 
NVIAKFVNAS TMDGYNPYRI TKEGIDWEVE EPDDPWSYIG YWGDHQIIYL QKMLELSNQF 
HPKRLSALLY RDIFSYANVP YRIGAFEALA KDAKSTVTYD DELAALIEHR VESMGADGKL 
VLDRDNQVYQ VNLLEKLLVP LLCKLGNLVI DGGLWLNTQR PEWNDANNAL VGQGLSIVTL 
CYLRRYVSFL LNLLAKETKA VSLSTEVCDW LNETATALSK VRPLLNGTEL TPQQRYQSLA 
ELGRAASDYR QSVYQEHPFS GKKESDISTI TQLLEDARLA IDHTINTNRT EIGLYNAYNL 
LDLQSDVVNI GSLYPMLEGQ VAALSSGVLP SSEAINLLET LFESDIYRAD QQSFMLYPDR 
ELPSFLEKNI IPKHSVIASP LLKDMVEKRD ERIIVQDSEG VFRFNAELSN ANDLIQQLEI 
ISTEPDCPIN ANKESILELY ESVFNHKAFT GRSGGMFGFE GLGCIYWHMV SKLLLATMEN 
FFTALQQDDK ESTQALGQLY YRIRAGIGFN KSPEEYGAFP TDPYSHTPKT AGAQQPGMTG 
QVKEEILTRF GELGIRVSQG EVHFQPNLLR AAEFTSQAAE FTYLDVSNQW QKIAVPSSSL 
SFTWCQVPII YVLNDELAPQ MSILWSDGRE KTIPHTTLSS DLCYELFMRN GHIRQIKLTL 
NSTQLFN