| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4377 |
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| Symbol | |
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| ID | 6118732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5299912 |
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| End bp | 5301321 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635939 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001762724 |
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| Protein GI | 170728698 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAA ATCAGAAATA TCTAACTATA TTGAAGCTCA CTTTTTGCTT ATCTTTGCTA
AGTGGATGCT CGGAATATAC CCACAAAAAC CAATCAACCA CGGTACCTAG CAAACAGGAC
AGTTACCACT CGTCTCCTCA AATATTAAAG GGTCATCATG ATACCAGCGC CACAGTCTGG
GCCCTAAACC TAGGGGGACC TGAATACCAA GGTATAGATG GAGTTCGCTA CCAAGCGGAT
TCACTATCTC CTCCAGATGA AATTCGTCGC ATGAACAAGG TTTTTGGTAC TCAGTATCAG
CACCTTTATC AAACCTATCG TGTGGGGGAT ATTAAGATCC GTCGACCTAT GACAAACGGA
CTTTATGACA TCACATTTAA GTTTGCAGAA CCCGAAGACA TTCCCATCGG AGCTCGGGTT
TTTGATGTTT TAGCACAAGG TAAGCCTGTC ATTGAAAACT TAGATGTCAG GCAAGCAAGA
GATGGAAAAC ATTCTTCCGC CTTATCAAGA ACAGTGACAG ATGTAGAGAT CACTTCTGGC
CAGTTAGATA TTCAGCTTGT TTCCACCCAA GGGCAACCCA TTTTAAATGC CATTCTTGTC
AGCAAAAAAC AGCCAAAATC AAACAAGTGG AAGTTTGTTT GGGGCGATGA GTTTAACTAT
AAAGGACGAC CTGATAACAC CAAATGGAAT TTGGATATTT GGCCAGCGAG AAAGGTCAAC
GATGAAGACC AAGCTTATAC CGCCCGACCT GAAAACATAG AGGTAAATGG AGGTAATTTA
GTTATTACAG CCCGTAAAGA GAATTACGCT AACGCCGAGT ACACCTCAGC CAGAATACAC
GCTAAGGGGA AAGGTGATTT TCTTTATGGG CGTGCTGAGA TACGCGCAAA AATTCCTGCA
GGACAAGGCA CTTGGTCTGC TATCTGGATG TTACCAAGCG ACCCTTACAA GTACGCCAGT
AGTTGCAAAA AAGATGAAGA GTGGCAGGGA AGTTCAAGCT GTGATGCTTG GCCCAATTCC
GGTGAGATAG ACATTATGGA ACATGTAGGT TTTGATATGC AAAACGTACA TGGCACAGTA
CACAACAGAG CTTATTATTG GGTAAATTGG CAGCAGCGAA AAGGCAGTAT TGAAGCCAAA
AATGTTGAGC AAGAGTTCCA CGTATATGCC ATGGAATGGA CCCCAGAAAA GATCACCATA
TTTTTTGATG ACACCCCCTA TTTTACCTAT TCAAACGAGT TAACAGGTTG GGAGGCTTGG
CCCTTCGACC ACCCATATCA CATCATCTTA AACTTAGCGG TTGGCGGCAT GTGGGGAAGA
GCTGGTGGCC CAATAGATGA CTCAATATTT CCAGTAAAAA TGGAAGTGGA TTACGTCAGA
GTGTATCAAC AATTGAATGA TACCCCGTAA
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| Protein sequence | MDRNQKYLTI LKLTFCLSLL SGCSEYTHKN QSTTVPSKQD SYHSSPQILK GHHDTSATVW
ALNLGGPEYQ GIDGVRYQAD SLSPPDEIRR MNKVFGTQYQ HLYQTYRVGD IKIRRPMTNG
LYDITFKFAE PEDIPIGARV FDVLAQGKPV IENLDVRQAR DGKHSSALSR TVTDVEITSG
QLDIQLVSTQ GQPILNAILV SKKQPKSNKW KFVWGDEFNY KGRPDNTKWN LDIWPARKVN
DEDQAYTARP ENIEVNGGNL VITARKENYA NAEYTSARIH AKGKGDFLYG RAEIRAKIPA
GQGTWSAIWM LPSDPYKYAS SCKKDEEWQG SSSCDAWPNS GEIDIMEHVG FDMQNVHGTV
HNRAYYWVNW QQRKGSIEAK NVEQEFHVYA MEWTPEKITI FFDDTPYFTY SNELTGWEAW
PFDHPYHIIL NLAVGGMWGR AGGPIDDSIF PVKMEVDYVR VYQQLNDTP
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