| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4366 |
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| Symbol | |
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| ID | 6118721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5279458 |
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| End bp | 5281689 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635929 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001762714 |
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| Protein GI | 170728688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC AAGATCATTC ACAGTTTAGT AGTGAGCAGC TAAGTGAAGT TGATTCTTAT
ATCGACGATT TACTGTTGCA GATGACATTG AGTGAGAAAG TAGGCCAGAT GAGCCAGTGT
TCAGGGGTGG GCGGCTTTTT GCCAAATGAG CTGGTGGAGG ATATTCAAGG TGGCAAGGTA
GGCTCTGTTA TCAATGAGGT GAACCTTGAT GTGGTCAACG AGATGCAACG CATTGCGGTT
GAAGAGAGTC GACTAGGTAT ACCTCTGTTG ATTGGCCGGG ATGTGATCCA CGGCTTTAAA
ACCATATTCC CAATCCCCTT AGGACAAGCG GCTAGTTGGT CTCCAGAAGT GGTTAAGCTT
GGAGCAAAGA TAAGTGCAAT GGAGTCGGCA TCTGTCGGTG TTAATTGGAC CTTTGCACCT
ATGATTGATA TCAGCCGCGA TCCTCGTTGG GGGCGGGTTG CTGAAAGTTT AGGGGAAGAT
CCCTATCTAT GTTCAGAGCT AGGCAAGGCG ATGATTACTG GTTTTCAAGG CGACTCTTTA
TCTGCGCCCG GCGCTATTGC GGCATGCGCT AAACATTTTG CTGGATATGG CGCAGCGGAA
AGTGGCCGAG ACTACAACAC AGTTAACCTT TCAGAACATG AGCTGAGAAA TGTATATCTG
CCCCCTTTTA AGGCAGCCGC TCAAGCAGGG GTTGCCACTT TTATGTCTGC TTTTAATGAA
CTTAATGGGA TTCCAGCTTC AGGTAATGAG TGGCTGATGA AGCAAGTGCT TCGTGAAGAG
TGGGGTTACG ACGGGTTTGT GGTTAGCGAC TGGGAGTCGA TTAAGCAGTT AACTATTCAT
GGTTTCTGTG AAGATGAAAA GATGGCGGCA TTTGAGGCCA TTAATGCTGG TATTGATATG
GAGATGGTAA GCAGAAGTTA TCAGCAGCAT CTTGAAGCTT TGATAGATGA GGGCAAGCTT
GAGTTAGCCC AGATTGATAT TATGGTGAGA CGTATCCTCA CCTTGAAGTA TGAGTTAGGC
CTGTTTGATA ACCCGTTTAC CGATCCTAAA ACACTGCCCA CTTTGCTTAA CCCCTCACAT
CTATTAGCTG CAAAAGAGGC TGCGATCAAA TCTTGTGTGC TGTTAAAAAA TAGCGAGAAC
AAGTTACCTT TAGATAAACA TCAGCTTCAA TCCATCGCAG TGATAGGCCC TTTGGCCGAT
GATGGTTATG AACAGTTAGG AACTTGGATT TTTGATGGTG AAGCTGAGCA TAGCACTAGC
TGCTTAGCTG CGTTAAAAGA TTATGTAGGT TCAGAGGTAG AGATTAAATT TGCTCAAGGG
CTGGAGACTT CACGTAGTGA GCAGCAAGCT GGATTTGATG AAGCTGTTAA CCTTGCCCAT
GAGTCTGATC TGGTGTTGAT GTTTTTGGGG GAGGAGTCGA TTTTATCAGG GGAGGCTCAC
TGCCGTTCAA ACATCAATCT TCCTGGTGCT CAAGAGCAGC TGATTGAGGC CGTCGCTGCT
ACTGGGAAGT CTATTGTTTT GGTGGTAATG GCAGGAAGGC CGCTGACACT GACGAATGTG
ATTGATAAAG TTGATGCCGT TCTTTATGCC TGGCATCCGG GAACGATGGG AGGGCCAGCG
ATTACCGAGT TACTGTTTGG TATCAAAGCC CCTTCGGGCA AGCTTCCTAT CAGTTTTCCT
CGTGTTGTTG GGCAGATCCC CCTCTATTAC TCACAAAAGC ACACAGGTAA ACCCGCCACA
GATGAGAGTT TTGTGCATAT GAAGGATATT CCTCAGCGAG CTCAGCAAAC CTCACTCGGT
ATGGCAGCAA CTCACCTCGA TACCCATTTC ACCCCTTTAT TTCCTTTTGG ATTCGGCCTC
TCGTATAGTG AATGTCACTA TAGAGATATC GAGGTCAGTC ATACCGCTAT CGCTATGGGT
GGTACGGTTA CGATCACAGC TCAAGTCTCG AATGTGGGTA AACGAGAATG CGAAGAGGTG
GTCCAGCTCT ATGTTCGTGA TCTAGTGGCT AATGTGACGC GTCCAGTTAA AGAGTTAAAA
GGGTTTCAGC GCATCTCGTT AATGGCTGGT GAGAGTCAAG TGGTCAGCTT TTCTCTTCAC
ACTGATGATG TTGCCTTTTA TGACAGAAAC ATGGTGTTGA AAGCAGAGCC TGGACTGTTT
GATGTCTGGA TAGGTGGAGA TTCAGACACT CGGCTGCGTA GTCAATTTAG TATCAAGGGA
GATGATATGT GA
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| Protein sequence | MSEQDHSQFS SEQLSEVDSY IDDLLLQMTL SEKVGQMSQC SGVGGFLPNE LVEDIQGGKV
GSVINEVNLD VVNEMQRIAV EESRLGIPLL IGRDVIHGFK TIFPIPLGQA ASWSPEVVKL
GAKISAMESA SVGVNWTFAP MIDISRDPRW GRVAESLGED PYLCSELGKA MITGFQGDSL
SAPGAIAACA KHFAGYGAAE SGRDYNTVNL SEHELRNVYL PPFKAAAQAG VATFMSAFNE
LNGIPASGNE WLMKQVLREE WGYDGFVVSD WESIKQLTIH GFCEDEKMAA FEAINAGIDM
EMVSRSYQQH LEALIDEGKL ELAQIDIMVR RILTLKYELG LFDNPFTDPK TLPTLLNPSH
LLAAKEAAIK SCVLLKNSEN KLPLDKHQLQ SIAVIGPLAD DGYEQLGTWI FDGEAEHSTS
CLAALKDYVG SEVEIKFAQG LETSRSEQQA GFDEAVNLAH ESDLVLMFLG EESILSGEAH
CRSNINLPGA QEQLIEAVAA TGKSIVLVVM AGRPLTLTNV IDKVDAVLYA WHPGTMGGPA
ITELLFGIKA PSGKLPISFP RVVGQIPLYY SQKHTGKPAT DESFVHMKDI PQRAQQTSLG
MAATHLDTHF TPLFPFGFGL SYSECHYRDI EVSHTAIAMG GTVTITAQVS NVGKRECEEV
VQLYVRDLVA NVTRPVKELK GFQRISLMAG ESQVVSFSLH TDDVAFYDRN MVLKAEPGLF
DVWIGGDSDT RLRSQFSIKG DDM
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