| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4362 |
|---|
| Symbol | |
|---|
| ID | 6118717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5273993 |
|---|
| End bp | 5274961 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641635925 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001762710 |
|---|
| Protein GI | 170728684 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCT TAAGTCGCTC CTCCGAACTC GCTATCGATG CTAAGGGGCT CACTAAGAAG
TTCGGTCAAC TGGCTGCCGT ATCTGATCTA AACCTGCAAG TGCCTAAGGG GCATATTTAC
GGCTTTCTTG GACCTAATGG CTGTGGTAAA TCCACCAGCA TACGTATGTT AACTGGCTTG
CTAACACCCA CTGAGGGCTC CATTCAAGTA TTAGGCATGT CGATACCCAA ACAAGCCGAA
GCACTCAGGT TACGAATAGG CTATATGACC CAGAAGTTCT CCCTCTATGA GGATCTTACC
GTCAAGGAAA ACCTAGAGTT TATCGCCCAG ATCTACTGCC TGAGTCCCAA TGACAGTCAT
AGCAAAATAT CTAAGTTGAT CAGCACCTAT AACTTGCTCA AACAGCAACA TCAGTTTGCA
GGCACCTTAA GCGGAGGACA AAAACAGCGA CTATCACTGG CCTGTGCCTG CCTTAACGAT
CCTGAACTAC TGTTTCTCGA TGAGCCCACC TCGGCTGTTG ATCCACAAAA CCGGCGGGAT
TTTTGGGAGC AGCTGTTCGA TCTATCTGAA ACTGGTACCA GTATCTTGGT CACCACCCAC
TATATGGATG AAGCGGAGCG TTGCCATGGT CTTGCGATTA TGGAGCAAGG TTTTATCCGC
GCCGATGGCA GCCCCAATGA TTTAATGCAG CAGATGGGCG CAAATGTGCT CGAAGTGAGT
CACTCTAACC TAAGGGAGCT TAAAAACTCC CTGACCACCT TTAAAGAGAT CAAATCCGCA
GCCCAGCTCG GCTCTCGCTT ACGGGTTTTA GTCGACAATA GAGTCACCGA TCCCGCTACT
TGGCTAAGGC AGACAATGCC AACTCTACAT CAAGCTGAGA TAAGACTCGC CCCACCTAAC
CTTGAAGATG TGTTTGTGAC AGTCACTGGC CAACAGCCTT CCTCCTCACT AACCTCGGCG
GAGGTGTAA
|
|---|
| Protein sequence | MSSLSRSSEL AIDAKGLTKK FGQLAAVSDL NLQVPKGHIY GFLGPNGCGK STSIRMLTGL
LTPTEGSIQV LGMSIPKQAE ALRLRIGYMT QKFSLYEDLT VKENLEFIAQ IYCLSPNDSH
SKISKLISTY NLLKQQHQFA GTLSGGQKQR LSLACACLND PELLFLDEPT SAVDPQNRRD
FWEQLFDLSE TGTSILVTTH YMDEAERCHG LAIMEQGFIR ADGSPNDLMQ QMGANVLEVS
HSNLRELKNS LTTFKEIKSA AQLGSRLRVL VDNRVTDPAT WLRQTMPTLH QAEIRLAPPN
LEDVFVTVTG QQPSSSLTSA EV
|
|---|
| |