Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4352 |
Symbol | |
ID | 6118707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5263328 |
End bp | 5264125 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635915 |
Product | response regulator receiver protein |
Protein accession | YP_001762700 |
Protein GI | 170728674 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAC TGTTACCTAG TGAACTTTCG ATACTGCTTT TAGAAGCGTC AGATACACAA AGAAAGATTA TCAGTAGTAA GCTGTCAGAA GAGGGCTTCA GTAATATTCA AACTGCGACA ACTATTACTG ATGCACTCAC TATCATTAGC CGCTACCAGC CAGATCTCAT CACCAGCGCC ATGCATTTCG AAGATGGGAC TGCACTTGAT CTCCTAAAAC AGGTTAGAGA GAACTCCCAA TATGAAGATA TACAGTTTAT GTTGGTTTCA TCTGAGTGCC GCCGTGAACA TTTAGAGGTA TATAGACAAG CTGGAGTTGT CGCCATTTTG CCAAAGCCTT TCGCATCAGA GCACCTACTG AAGGCCTTAA ACTCAACGTT AGATCTATTA AGTGATGATG AGCTAGAACT CAGCCACTTC GATGTGCATG ATCTAAAAGT CTTAGTCGTC GATGATAGTA AGATGGCAAG AAATATTATT AAACGTACCA TCTCAAACTT AGGACTTAGA TTAATAACCG AAGCCGTTGA TGGCGCCCAA GCAATAGAGA TCATGCAAGA TAACCTGTTT GATCTAGTCA TTACCGATTA CAACATGCCA AGTGTCGATG GACTGGCATT AACTCAGTTT ATTCGTAATG ACAGCCAGCA GTGTCACGTG CCGATACTGA TGGTCTCCTC TGAAGCAAAT GATGCTCACC TAACCAATGT GGCTCAAGCT GGCGTGAATG CGCTTTGTGA TAAACCCTTT GAGCCTAAGT TAGTTAAGCA GTTGCTCTAT CAACTGCTAG ATGATTAA
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Protein sequence | MSTLLPSELS ILLLEASDTQ RKIISSKLSE EGFSNIQTAT TITDALTIIS RYQPDLITSA MHFEDGTALD LLKQVRENSQ YEDIQFMLVS SECRREHLEV YRQAGVVAIL PKPFASEHLL KALNSTLDLL SDDELELSHF DVHDLKVLVV DDSKMARNII KRTISNLGLR LITEAVDGAQ AIEIMQDNLF DLVITDYNMP SVDGLALTQF IRNDSQQCHV PILMVSSEAN DAHLTNVAQA GVNALCDKPF EPKLVKQLLY QLLDD
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