Gene Swoo_4352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4352 
Symbol 
ID6118707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5263328 
End bp5264125 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content42% 
IMG OID641635915 
Productresponse regulator receiver protein 
Protein accessionYP_001762700 
Protein GI170728674 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC TGTTACCTAG TGAACTTTCG ATACTGCTTT TAGAAGCGTC AGATACACAA 
AGAAAGATTA TCAGTAGTAA GCTGTCAGAA GAGGGCTTCA GTAATATTCA AACTGCGACA
ACTATTACTG ATGCACTCAC TATCATTAGC CGCTACCAGC CAGATCTCAT CACCAGCGCC
ATGCATTTCG AAGATGGGAC TGCACTTGAT CTCCTAAAAC AGGTTAGAGA GAACTCCCAA
TATGAAGATA TACAGTTTAT GTTGGTTTCA TCTGAGTGCC GCCGTGAACA TTTAGAGGTA
TATAGACAAG CTGGAGTTGT CGCCATTTTG CCAAAGCCTT TCGCATCAGA GCACCTACTG
AAGGCCTTAA ACTCAACGTT AGATCTATTA AGTGATGATG AGCTAGAACT CAGCCACTTC
GATGTGCATG ATCTAAAAGT CTTAGTCGTC GATGATAGTA AGATGGCAAG AAATATTATT
AAACGTACCA TCTCAAACTT AGGACTTAGA TTAATAACCG AAGCCGTTGA TGGCGCCCAA
GCAATAGAGA TCATGCAAGA TAACCTGTTT GATCTAGTCA TTACCGATTA CAACATGCCA
AGTGTCGATG GACTGGCATT AACTCAGTTT ATTCGTAATG ACAGCCAGCA GTGTCACGTG
CCGATACTGA TGGTCTCCTC TGAAGCAAAT GATGCTCACC TAACCAATGT GGCTCAAGCT
GGCGTGAATG CGCTTTGTGA TAAACCCTTT GAGCCTAAGT TAGTTAAGCA GTTGCTCTAT
CAACTGCTAG ATGATTAA
 
Protein sequence
MSTLLPSELS ILLLEASDTQ RKIISSKLSE EGFSNIQTAT TITDALTIIS RYQPDLITSA 
MHFEDGTALD LLKQVRENSQ YEDIQFMLVS SECRREHLEV YRQAGVVAIL PKPFASEHLL
KALNSTLDLL SDDELELSHF DVHDLKVLVV DDSKMARNII KRTISNLGLR LITEAVDGAQ
AIEIMQDNLF DLVITDYNMP SVDGLALTQF IRNDSQQCHV PILMVSSEAN DAHLTNVAQA
GVNALCDKPF EPKLVKQLLY QLLDD