| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4340 |
|---|
| Symbol | |
|---|
| ID | 6118695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5253809 |
|---|
| End bp | 5254705 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641635903 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001762688 |
|---|
| Protein GI | 170728662 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4989] Predicted oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.898707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACC AATTTCAGAT GTCAGACTTT ATCGCAGGTT TTTGGAGATT AGCGAGTTGG
GATTACTCTA TACAACAAAG ATTGGCATTA ATTGAGCAAT ACTTGGAGCT GGGTGTTACG
ACCATGGATC ATGCAGACAT CTACGGCCAG ATGCAGTGTG AGGCTCTTTT TGGTGAAGCT
CTATCGCTCA AACCTAGCTT ACGCTCAAAA CTACAGCTAA TCAGTAAATG TGGCATTAAG
CCTGCGTTTG ACTCGACACC CGAACGTTAT GTTAACCACT ATGATACCAG CAGAGAGCAC
CTTTTAAATT CAGTGGAAAA TTCACTAACT AGACTCAATA CGGATCACTT AGATCTTCTG
TTAATTCACC GCCCCGACCC CTTAATGAAT GCAGATGATG TTGCCCACGC TTTCAAGCAC
CTGCAACAGT CAGGTAAGGT ACTGAATTTT GGTGTATCTA ACTTTAGCAC AGCACAATTC
GAGCTGTTGC AATCTAGGTT AACTCCACTA GGTATTCAGC TCGTAACCAA TCAAGTTGAA
ATATCGCCAG CGAATATGGC AAGTCTACAT GACGGAACTT TAGATCAATG TCAGCAATAT
AAGATCGCAC CTATGGCCTG GTCCTGTTTG GGGGGAGGAG AGATAATTAC AGGTCAAAAT
GCTCAGGCTG TCAGGTTAAG AGAAATACTC CACCGTGTTG CTGATAATCA TCAAACTCAA
GATATCAGTC AGATCATCTA CGCTTGGGTA GCTGCGCTCC CCTCTAAACC TAAACCTATT
ATCGGAAGTG GTAAACTACA ACGGATACAG AGTGCAGTAA AATCGAAACA GATCAAACTA
GATAAGCAGG AGTGGTTCAG TATTTGGGAA GCATCAACTG GCCATAGCGT GCCCTAA
|
|---|
| Protein sequence | MSNQFQMSDF IAGFWRLASW DYSIQQRLAL IEQYLELGVT TMDHADIYGQ MQCEALFGEA
LSLKPSLRSK LQLISKCGIK PAFDSTPERY VNHYDTSREH LLNSVENSLT RLNTDHLDLL
LIHRPDPLMN ADDVAHAFKH LQQSGKVLNF GVSNFSTAQF ELLQSRLTPL GIQLVTNQVE
ISPANMASLH DGTLDQCQQY KIAPMAWSCL GGGEIITGQN AQAVRLREIL HRVADNHQTQ
DISQIIYAWV AALPSKPKPI IGSGKLQRIQ SAVKSKQIKL DKQEWFSIWE ASTGHSVP
|
|---|
| |