| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4338 |
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| Symbol | |
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| ID | 6118693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5250188 |
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| End bp | 5251789 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635901 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001762686 |
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| Protein GI | 170728660 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA TAATCGCCTT GATAATGCTT GCTATCGTAG GGCTTAGTAG CTTACCGGCT
CAAGCAGATA CATCCAGTGA ACTGACATCG CTACAAACCT CTATTCAGCA TGATGTCGCA
CTACTCAGCA AAACACACGG TGAACTCACC AACTTTACTG AGTATAAAAT TAAGCAGAAC
ACCGAACTGC TTCATGAAAA GCTTAAAGAG CTGATGGCAG AGCCTGATCT TAATAAAGAG
ATGCTTAGCC CAATCATTAA GAGTCACCTT ATCTTTATCG GTAAGGTCGA CAACTACTTC
AAGACTAAGA TTGCGACTCT TCAAGGGCAA CTTGGTAAGG GCGATGATAA CAAGATCATG
ATGCAACTTT CGATGTTGGA AGCTGAGCGT GATCAACAGT TACAAGCTTA CCTAGACGTA
CTTGGCTGGG CGAAGACTTT AGGCCTAAAT ACTGGTGACC AAACAGCGCA ACTGACCAAG
AACCTTATCG CTCGAGCAGA CGGCTTCAAT AGCTTTGTTC AATATACCCA AGATAAGCTA
AAGCAAGCTG TTAAAGAGGT CAGTTTAGCT GGTAAAGATG TGACTGCAGA GCAAACACTC
AACGTCACAG AGCTCAAAGA GCGCTTATCT TACGCTAGCT CAAGCTTAGG TGTTGCTATC
CATCTTCTCG ATATCTTAGG CCAAGATACA GCGGACATGA AGGAGACCCT ATTTAAGAGT
TCAGGAGATA TTACTCAAGA TGTGCTTAAT ATCGATGTTG CCAGTAGCTT ATTCGAGCAG
TGGCTTACAT CAGCACAAAA CTACTTAATA GAAAATGGTC CAGGGATCGT TTTTAAGTTG
TTTATTTTTG TTCTGATCTT AGTGGCAGCC TCTTTGATAG GTAAAGCCGT TCAGAAGTTA
GTCAGAAAAG CTGTTAGCAA CTCAAAGCTT AAGTTTAGCG TGCTGCTTCA AGAGTTCTTT
ATCTCACTCT CAGGCAAGGC AACCTTCACT TTAGGTGTCT TAATCGCCCT GTCTCAATTG
GGAATCGAAT TAGCACCCCT GCTAGCAGGT TTCGGTGTGG CCGGTGTGAT TATCGGTTTT
GCACTGCAAG ATACCCTGTC TAACTTTGCA TCTGGCATGA TGATCTTGGT TTACCGTCCT
TATGATGTTG GCGATCTGAT CAATGCAGCA GGTGTTACAG GTAAAGTCAG CCATATGAGC
CTAGTGTCTA CCACGATTAA GACACTGGAT AACCAGAGAC TGATCATTCC AAATAACAAG
ATTTGGGGTG ATACCATCAA CAACATCACA GTCGAGCATC AAAGACGTGT GGATATGACC
TTTGGTATTG GCTATAGCGA TGATATCGAG AAGACAGAGA AAGTACTGAA AGAGATCATC
ATGGCACATC CTAAGGTTCT TAAAACACCA GAGCCTACGA TTAAGCTACA TACTCTAGGT
GAGTCTTCTG TTGATTTCGT TGTTCGCCCA TGGGCTAAGC CAGAAGATTA CTGGGATGTT
TACTGGGATA TCACACGCAC AGTGAAGATG CGTTTCGATG CCGAGAATAT CAGTATTCCA
TTCCCTCAGC GCGATATTCA TATCTATCAA GAGAGCGTAT AA
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| Protein sequence | MHRIIALIML AIVGLSSLPA QADTSSELTS LQTSIQHDVA LLSKTHGELT NFTEYKIKQN
TELLHEKLKE LMAEPDLNKE MLSPIIKSHL IFIGKVDNYF KTKIATLQGQ LGKGDDNKIM
MQLSMLEAER DQQLQAYLDV LGWAKTLGLN TGDQTAQLTK NLIARADGFN SFVQYTQDKL
KQAVKEVSLA GKDVTAEQTL NVTELKERLS YASSSLGVAI HLLDILGQDT ADMKETLFKS
SGDITQDVLN IDVASSLFEQ WLTSAQNYLI ENGPGIVFKL FIFVLILVAA SLIGKAVQKL
VRKAVSNSKL KFSVLLQEFF ISLSGKATFT LGVLIALSQL GIELAPLLAG FGVAGVIIGF
ALQDTLSNFA SGMMILVYRP YDVGDLINAA GVTGKVSHMS LVSTTIKTLD NQRLIIPNNK
IWGDTINNIT VEHQRRVDMT FGIGYSDDIE KTEKVLKEII MAHPKVLKTP EPTIKLHTLG
ESSVDFVVRP WAKPEDYWDV YWDITRTVKM RFDAENISIP FPQRDIHIYQ ESV
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