Gene Swoo_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4334 
Symbol 
ID6118689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5247336 
End bp5248547 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content46% 
IMG OID641635897 
Producthypothetical protein 
Protein accessionYP_001762682 
Protein GI170728656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTA CTAATTTTCG CGTATCACAC GTGGCTGCTG CCTGTGCACT AATTTCTACT 
TCAGCTTTTG CTGAAAATCC GACACTGACA AACCCAGCGA TTAGTGCCGT ACTTGACGGT
TACTATCAAA ATACCGAGCG CCCTATGGCA GAGCGTGTTG AAGGTTTTGG TTTAGGGCAT
ACCGAGTTAG CCCTGAGCGC CAATGTCGAT GATATGTTTT ACGGTAAGTT AACCGCCGTT
GTTGAGATAC ATGAAGGTGA AACTGAGCTA GGAATTGAAG AAGCCTTTAT TCAAACTCTG
GCTATGCCTG GTGGATTCTC CATTCGTGCA GGTCGTTTCC TTTCCGATGT GGGTTATCTG
AACAATCAGC ACGTACACAC AGATGCATTT TCTGACAGAC CCGCGGCGTA TCGCGCCTTC
TTAGGCAGCC ACTATTTTGA TGATGGTGTT CGTTTTAATT ATGTTGCACC GACAGATCTC
TATTGGGCGA TGGGAGTCGA GGCATTTAAA GGTGATAGCA TGCGCGCCGC CGATGAACAT
AACGAGCGTG AGTATGAGGA GCTAGGTGTT TACACTGCTT ATACTAAGTT CGGTGGTGAT
ATTGGGGCCA ATGGTTCTTG GCAGGCTGGA TTGAGTTATA TGCGTAATGA AAATGGACGC
ATGACTGCAG CCGAGGAGCA TGATGGTCAT GAAGAGGAAG AGAGTGAACA TGACCATGGT
CATGAACATA GCCATAGCGC CCAGTATACA GGTGAAAATA CCTATATAGC TGATTTTGTT
TATAAATGGG CACCTAATGG TAACTATAAA TATCAACACC TTACGCTAAG TGGTGAGTAT
TTTAAGGTCA CTGATTTTAC GCCACTGGAG GAGCATGGCC ACGATGAGCC CGATCACGAG
CATGAAGTGG GGCAAGGTGT TGATGATCAA CAAGGTTGGT ATTTAAGTGG GGTATACCAG
TTCTCACCTA ATTGGTCTGC GGGTCTACGT TATGGTGAAG TGGAAACTCA AGAGATGCAT
GGTGATCACT TTCATGCTCA AAAGCTGAAA GAGACTGAAG CTAGCTTAGC TTGGCATCAC
AGCCACTTCT CTACAGTTCG TCTGCAGTAT ACTAACCAGA AAGGCACTAA CTTTGACGGA
ATCGAAGATG ATAACGTCAT CACTCTTCAA TATGTTATGA CTCTGGGGGC TCACGGTGCG
CATCAATTCT AA
 
Protein sequence
MRVTNFRVSH VAAACALIST SAFAENPTLT NPAISAVLDG YYQNTERPMA ERVEGFGLGH 
TELALSANVD DMFYGKLTAV VEIHEGETEL GIEEAFIQTL AMPGGFSIRA GRFLSDVGYL
NNQHVHTDAF SDRPAAYRAF LGSHYFDDGV RFNYVAPTDL YWAMGVEAFK GDSMRAADEH
NEREYEELGV YTAYTKFGGD IGANGSWQAG LSYMRNENGR MTAAEEHDGH EEEESEHDHG
HEHSHSAQYT GENTYIADFV YKWAPNGNYK YQHLTLSGEY FKVTDFTPLE EHGHDEPDHE
HEVGQGVDDQ QGWYLSGVYQ FSPNWSAGLR YGEVETQEMH GDHFHAQKLK ETEASLAWHH
SHFSTVRLQY TNQKGTNFDG IEDDNVITLQ YVMTLGAHGA HQF