| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4270 |
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| Symbol | |
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| ID | 6118625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5174438 |
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| End bp | 5175610 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635836 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001762621 |
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| Protein GI | 170728595 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAGATA ACATCATAGA AACACACAAA AATAGCACTT TCGTCCCGGT GGCAGGGCTA
TCGTTTTTTG CAATAGCATC CGGATTTTTA ATGAGCCTAA TTCCGCTCTC ATTATCTTCA
TTCGGTATTG ATAGCTCTAT GGTGCCTTGG CTTGCCAGTA TCTTTTATTT AGGTCTATTA
ATTGGTGCTA CTTGCATCGA AAGTATTGTT GCTAAAATCG GGCACAGAGT TGCATTCATT
GTATTTCTCT CTGTATTGAT CTCGACAATT CTTGTCATGT TAGCGATTCC CAATGCAGTC
ACATGGCTAA TATCACGCTT TGTCGCAGGT TTCGCTGTTG CGGGTATCTT TGTTGTGGTC
GAGTCTTGGT TGTTGATGGC CGACAGCGCA AAACAGAGAG CGAAACGCTT AGGGCTCTAT
ATGACCTCGC TTTATGGCGG CAGCGCCTTA GGTCAACTTG GTATAGGACC CGTTGGAGTG
AATGGATTTT TTCCATACCT TTGTGTGCTT GGCTTGCTAA TGCTAGCCAT TCTGCCTCCA
CTTCTAGTGA AAAGTGGGCA GCCAAAAAAT GAGCATAACC AAAAGCTAAA ATTGAGTGAG
ATTAAAAAGC TAAGCCGTCC AGCGATACTA GGCTGTCTAG TTTCGGGCCT ATTACTCGGC
CCGATATACG GTTTACTGCC TGTGTACATC ACAAGCCAAG TTGATAACCC AGAGCAAACT
GGAGTACTAA TGGCCACCAT CATTTTAGGT GGTATGTTGG TACAACCTCT TGTGAGCTTC
TTATCACCTA AGGTGAGTAA GAGCTTGTTG ATGGCACTAT TTTGCTTATT TGGTGCACTG
GCTGTATTTG GTATTTTAGA GTCGCGCTCA TTTATGGTGA TGGCGGTAAG TTACATGCTG
TTAGGCGCCT GTAGCTTCGC TCTCTATCCT ATCGCTATCA CACTCGCCTG TGATGCAATA
TCGATGGAAA AGATAGTTTC AGCAACAGAG GTGATGTTAT TAAGCTACAG CGTGGGATCG
GTTCTAGGAC CACTATGCGC TACCAGCTTT TCAGATTCAC CTGACTCTGT GATCTTTTAT
CTAGGCGGCT GCTTAACAAC GACCTGCCTC TATATGTTCA TCAAGAGCAT CGAAAAGATC
CACACAGGTC AAACGCCAAT TCCAGGCGCT TAA
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| Protein sequence | MIDNIIETHK NSTFVPVAGL SFFAIASGFL MSLIPLSLSS FGIDSSMVPW LASIFYLGLL
IGATCIESIV AKIGHRVAFI VFLSVLISTI LVMLAIPNAV TWLISRFVAG FAVAGIFVVV
ESWLLMADSA KQRAKRLGLY MTSLYGGSAL GQLGIGPVGV NGFFPYLCVL GLLMLAILPP
LLVKSGQPKN EHNQKLKLSE IKKLSRPAIL GCLVSGLLLG PIYGLLPVYI TSQVDNPEQT
GVLMATIILG GMLVQPLVSF LSPKVSKSLL MALFCLFGAL AVFGILESRS FMVMAVSYML
LGACSFALYP IAITLACDAI SMEKIVSATE VMLLSYSVGS VLGPLCATSF SDSPDSVIFY
LGGCLTTTCL YMFIKSIEKI HTGQTPIPGA
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