Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4259 |
Symbol | |
ID | 6118614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5161805 |
End bp | 5162389 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635825 |
Product | PGAP1 family protein |
Protein accession | YP_001762610 |
Protein GI | 170728584 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00348769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAG TGTTAGTTCA TGGGATCTTT AATACGGGGA GAGTGATGAG CCGGATGCAG AAGAGCTTTG AGGCCGAAGG CTATGAGTGT TTTGCTCCGA CATTAGCGCC GTTTGATGGC AGCTTAGGTA TCGAACATGC GAGTACCAGT TTAAAGCAGC AGATAGAGCT AAGGTTTGGT GAGCATGAGA TGATCACGCT TGTGGGTTTT AGCATGGGTG GGATAGTTGC CAGATATTAT CTACAAGCGT TAGGGGGAGC CAAACGGGTG GCGAATCTCT TTACGTTGTC GTCTCCCCAT CATGGGACTT ATACCGCTTA TCTTCCCTAT CCCTCAAAAA CATTTAAACA GCTAAGACCA AACAGTAAGC TATTGCGTTT TTTACAAGAG AATGAGGAGA CTCTGGAGGG GGTGAACTTG TTCTCTTACT GGACGGCTAT CGATTACACC ATAGTACCGA GTTCGAGCTC ACTTTGGCCT TGGGCTAAAA ATAAACGCTT CTTTATTTTC TTACATCTGT CGGTGATCTT TAGTCGTAAG ATCACCGATG AGATTATTGC AGAGCTAAGA GGCGCAGTAG CTTAA
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Protein sequence | MKIVLVHGIF NTGRVMSRMQ KSFEAEGYEC FAPTLAPFDG SLGIEHASTS LKQQIELRFG EHEMITLVGF SMGGIVARYY LQALGGAKRV ANLFTLSSPH HGTYTAYLPY PSKTFKQLRP NSKLLRFLQE NEETLEGVNL FSYWTAIDYT IVPSSSSLWP WAKNKRFFIF LHLSVIFSRK ITDEIIAELR GAVA
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