| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4248 |
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| Symbol | |
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| ID | 6118603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5147658 |
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| End bp | 5148332 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635814 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001762599 |
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| Protein GI | 170728573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000908263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000127118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCAGAGTT TGAAGAAGTT TTTTGCAGTA AAAGCAGTAC TAGCTTGTTC ATTGGTAGCG
TTAACTGGTT GCCAAACGAC GAACCCTTAT ACCAATGAAT CACAAAATGC TAAGGCAACA
AATGGTGCCA TTATAGGTGC TATTGCGGGT GCTGCGATTG GTGTTGCATC ATCGAGTAAG
AGTGATCGAG GTAAAGGTGC GTTAATTGGT GCTGCTTCTG GAGCTGCACT AGGTGGCGGT
ATCGGTTACT ACATGGATAC TCAGGAAGCA GAGCTAAGAA AGCAGCTACA ATCGACTGGT
GTGAGTGTGA CTCGCAGTGG CGACAATATT ATCTTAAATA TGCCTAATGA AGTTACCTTT
GGGGTTGATG AGACACACTT GAGTGCGGGT GCTAAGAGAG TACTAAACAG TGTGGCATTA
GTGGCGAAAG AGTATGACAA GACGCGTTTG AATGTGCTTG GCTTCACCGA TAGCTCAGGC
TCTGAATCTT ATAACTTACG GCTCTCTAAA GTACGTGCTG TTGAGGTTGC TGATTACCTT
GTTTCTCAGA AAGTTGAGTA TGTCAGAGTG AAATCTGATG GTATGGGTGA AGAGAGACCG
ATTGCATCAA ATGCCACTAA AGAGGGACGT GCGGAGAATC GCCGTGTTGA AATTATTTTG
AGCCCACTCT CTTAA
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| Protein sequence | MQSLKKFFAV KAVLACSLVA LTGCQTTNPY TNESQNAKAT NGAIIGAIAG AAIGVASSSK
SDRGKGALIG AASGAALGGG IGYYMDTQEA ELRKQLQSTG VSVTRSGDNI ILNMPNEVTF
GVDETHLSAG AKRVLNSVAL VAKEYDKTRL NVLGFTDSSG SESYNLRLSK VRAVEVADYL
VSQKVEYVRV KSDGMGEERP IASNATKEGR AENRRVEIIL SPLS
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