| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4241 |
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| Symbol | |
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| ID | 6118596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5142973 |
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| End bp | 5143260 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641635807 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001762592 |
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| Protein GI | 170728566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000242009 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAATAA ACGTAACAGG TCATCACATC GAAATTACCA CATCGCTACG CCAATATATT
GAAGAAAAGT TTTCAAAGCT TGAACGACAT TTCGATCAGA TCAATAATGT GCACGTTATT
TTGAATGTTC AAAAAATGCA GCAGAAAGCA GAAGCCAAAC TCCATCTTGC TGGAGGTGAG
GTTTTCGCCG CGTCACAACA TGCGGATATG TATGCAGCAA TAGACTCCCT GATTGACAAG
CTCGACCGTC AGGTAATTAA ACATAAAGAG AAGCAAACAA AACACTAA
|
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| Protein sequence | MQINVTGHHI EITTSLRQYI EEKFSKLERH FDQINNVHVI LNVQKMQQKA EAKLHLAGGE
VFAASQHADM YAAIDSLIDK LDRQVIKHKE KQTKH
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