Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4237 |
Symbol | |
ID | 6118592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5139181 |
End bp | 5139738 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641635803 |
Product | hypothetical protein |
Protein accession | YP_001762588 |
Protein GI | 170728562 |
COG category | [S] Function unknown |
COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.830949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000311603 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAGAG TCACCCTCGC CATTATCGCC TTCTTTGGTA CCGCACTTCT GCTCTACTGG CAGGTGCAAT CCAAACGAGG AGATGAGGGG TTAGCTGTCG ATGTTAGCGC CCGACCCGAT TATATTGCTG ATAACCTAAA AAGTGTTGAA TACAATGAAC TTGGCTTAGT TAATAGCCGG GTTAGTGCTA AACATATGGA GCATTATGAA GAGGATAATA TGACCTACTT CACCGAGCCT ATCTATCTGG TGTACCCTGA GCAAGGCGAG GCTCAGTGGC AGCTACAATC GACCAAAGGC ACCATGAATA AAAATTCAGG AAAAGTCATA CTCGAAAACA ATGTTATCAT CAACGCCATA AACAGCAATG AGCCGATACA GTCGATCAAA ACAAGCTATC TTGAGTTGGA TCTCAATACC ATGATCATGA CATCCGATGA CAATATCTAT ATCACAGGTA GCGACTTTAT TATTGAAGGG GTTGGTCTAT ATGCCGACCT CAACGCTGAA AACGTAAAAT TAACCAGTCA GGTTAATGGC ACCTACTCAG CACACTAG
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Protein sequence | MNRVTLAIIA FFGTALLLYW QVQSKRGDEG LAVDVSARPD YIADNLKSVE YNELGLVNSR VSAKHMEHYE EDNMTYFTEP IYLVYPEQGE AQWQLQSTKG TMNKNSGKVI LENNVIINAI NSNEPIQSIK TSYLELDLNT MIMTSDDNIY ITGSDFIIEG VGLYADLNAE NVKLTSQVNG TYSAH
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