Gene Swoo_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4237 
Symbol 
ID6118592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5139181 
End bp5139738 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID641635803 
Producthypothetical protein 
Protein accessionYP_001762588 
Protein GI170728562 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.830949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000311603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGAG TCACCCTCGC CATTATCGCC TTCTTTGGTA CCGCACTTCT GCTCTACTGG 
CAGGTGCAAT CCAAACGAGG AGATGAGGGG TTAGCTGTCG ATGTTAGCGC CCGACCCGAT
TATATTGCTG ATAACCTAAA AAGTGTTGAA TACAATGAAC TTGGCTTAGT TAATAGCCGG
GTTAGTGCTA AACATATGGA GCATTATGAA GAGGATAATA TGACCTACTT CACCGAGCCT
ATCTATCTGG TGTACCCTGA GCAAGGCGAG GCTCAGTGGC AGCTACAATC GACCAAAGGC
ACCATGAATA AAAATTCAGG AAAAGTCATA CTCGAAAACA ATGTTATCAT CAACGCCATA
AACAGCAATG AGCCGATACA GTCGATCAAA ACAAGCTATC TTGAGTTGGA TCTCAATACC
ATGATCATGA CATCCGATGA CAATATCTAT ATCACAGGTA GCGACTTTAT TATTGAAGGG
GTTGGTCTAT ATGCCGACCT CAACGCTGAA AACGTAAAAT TAACCAGTCA GGTTAATGGC
ACCTACTCAG CACACTAG
 
Protein sequence
MNRVTLAIIA FFGTALLLYW QVQSKRGDEG LAVDVSARPD YIADNLKSVE YNELGLVNSR 
VSAKHMEHYE EDNMTYFTEP IYLVYPEQGE AQWQLQSTKG TMNKNSGKVI LENNVIINAI
NSNEPIQSIK TSYLELDLNT MIMTSDDNIY ITGSDFIIEG VGLYADLNAE NVKLTSQVNG
TYSAH