| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4234 |
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| Symbol | |
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| ID | 6118589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5136502 |
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| End bp | 5137461 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635800 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001762585 |
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| Protein GI | 170728559 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000309074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTATTTA ATATTTTCAT GCTTATCGCC GGATTAGTCG CTCTAGTCTG GAGTGCTGAC
AAATTTGTCT ATGGCGCTGC AGCTTTTGCC AGAAATCTTG GCCTCCCTCC TATGTTAATT
GGATTAACCA TCGTCGCCAT GGGCAGCTCA GCCCCGGAGA TGTTCGTCGC TGCGACCGCC
TCGATGGAAG GGATGACAGA TACCGCAATT GGAAATGTTT TAGGCTCAAA TGTTGCAAAT
ATCACACTGA TTTTAGGGAT CACCGCCCTA CTTGGTGCCA TTGCTGTTAG CTCGCAAACG
TTAATGCGAG AGATCCCCTT GATGATTATT GCCACCGTTA TCGCTGGCTA CTTCCTCCAT
GACGGTATGC TGACCCGTAT AGAGGGCTTT ATGCTATTAG GCCTCTTCTT TATGTTGATG
GGCTACTTTA TCTGGCACGC CGTCACGAAT AAGAAAAAAG ATGCATTGGA AGAAGAAGCT
GACAGCGAGA TCCCAACTGG TGTTCCCACA TCCAGAGCAA TACTCTGGCT TATTGTCGGT
ATTGTACTTC TACCACTCTC AGCAGACTGG ATGGTACAAG GGGCTGTTGG TATTGCCAAA
GCCTACCACC TGTCAGACCT AGTCATAGGC TTAACGATTA TTGCTATTGG TACCAGCCTA
CCTGAACTGG CAGCATGTGT TGCGGGCGTA ATGAAAAAAG AGGATGATCT GGCAATAGGG
AATATCGTAG GCTCAAACCT ATTCAATATT TTAGCTGTAT TAGCCATTCC GGGAATAATT
GCTCCCGGCG CCGTTGATGC AGCCGCCAGT AGTCGTGATT TTTATATGGT ACTGGCTACC
AGCAGTGCAC TTGCTGTATT TATATTATTA AGTGGCCGAG CAAGAGCATT AAAACGCTGG
CATGGTGTAG TACTACTATG CACCTTTATC GCCTATCAGT TAATCCTGTT TCAGGCTTAA
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| Protein sequence | MLFNIFMLIA GLVALVWSAD KFVYGAAAFA RNLGLPPMLI GLTIVAMGSS APEMFVAATA
SMEGMTDTAI GNVLGSNVAN ITLILGITAL LGAIAVSSQT LMREIPLMII ATVIAGYFLH
DGMLTRIEGF MLLGLFFMLM GYFIWHAVTN KKKDALEEEA DSEIPTGVPT SRAILWLIVG
IVLLPLSADW MVQGAVGIAK AYHLSDLVIG LTIIAIGTSL PELAACVAGV MKKEDDLAIG
NIVGSNLFNI LAVLAIPGII APGAVDAAAS SRDFYMVLAT SSALAVFILL SGRARALKRW
HGVVLLCTFI AYQLILFQA
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