Gene Swoo_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4222 
SymbolrplM 
ID6118577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5126496 
End bp5126927 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content42% 
IMG OID641635788 
Product50S ribosomal protein L13 
Protein accessionYP_001762573 
Protein GI170728547 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000936521 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00032903 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACTA CTTTTACTGC TACACCAGAG ACAGTCACTC GCGAGTGGTT TGTCGTTGAC 
GCTGAAGGTA AAACTTTAGG TCGTATCGCT ACTGAAATTG CTACACGTCT ACGTGGTAAG
CATAAGCCAG AGTATACACC TCATGTTGAT ACCGGCGATT ACATCATCGT TATTAACGCT
GAGAAAGTTG CTGTCACTGG TAATAAAGCG AAAGGCAAAG TGTACTACTC GCATTCGGGT
TTCATCGGTG GTATTAAGCA AATCACTTTT GAAAAGCTGC AAGATCATAA GCCTGAAATG
ATTATCGAGA AAGCAGTTAA GGGTATGTTA CCTAAAGGTC CTTTAGGACG TGCCATGTTC
CGTAAACTTA AAGTTTACGC TGGTACAGAA CATAACCACG CTGCACAACA ACCTCAAGTT
CTTGATATCT AA
 
Protein sequence
MKTTFTATPE TVTREWFVVD AEGKTLGRIA TEIATRLRGK HKPEYTPHVD TGDYIIVINA 
EKVAVTGNKA KGKVYYSHSG FIGGIKQITF EKLQDHKPEM IIEKAVKGML PKGPLGRAMF
RKLKVYAGTE HNHAAQQPQV LDI