Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4221 |
Symbol | rpsI |
ID | 6118576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5126089 |
End bp | 5126481 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635787 |
Product | 30S ribosomal protein S9 |
Protein accession | YP_001762572 |
Protein GI | 170728546 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000135609 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000316349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGCAA CTCAGTACTA CGGCACAGGC CGTCGCAAAA CATCTACAGC TCGCGTATTC GCGAAAGTAG GAACTGGTAA CATCGTTGTT AACCAACTTC CTCTAGATCA ATATTTTGGT CGTGAAACTT CTCGTATGGT TGTTCGTCAG CCACTTGAGC TAGTTGAAAT GACTGACAAG TTAGACATCT TTGTAACTGT TAAGGGTGGT GGTAACACTG GCCAAGCAGG TGCTATTCGT CACGGTATTA CTCGTGCGTT GATGGAACTT GATGAGTCTC TACGTCCTTC TCTACGTGCC GCTGGTTTCG TTACCCGTGA TGCTCGTAAA GTTGAGCGTA AGAAAGTTGG TCTACGCAAA GCACGTCGTA AGCCACAATT CTCTAAGCGT TAA
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Protein sequence | MAATQYYGTG RRKTSTARVF AKVGTGNIVV NQLPLDQYFG RETSRMVVRQ PLELVEMTDK LDIFVTVKGG GNTGQAGAIR HGITRALMEL DESLRPSLRA AGFVTRDARK VERKKVGLRK ARRKPQFSKR
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