Gene Swoo_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4219 
Symbol 
ID6118574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5124378 
End bp5125673 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content46% 
IMG OID641635785 
Productadenylosuccinate synthetase 
Protein accessionYP_001762570 
Protein GI170728544 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000317238 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000431125 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAAA ACGTCGTAGT TCTCGGCACC CAATGGGGTG ACGAAGGAAA GGGTAAGATA 
GTCGATCTTC TTACCGAACA GTCAAAATAT GTCGTTCGAT ATCAAGGTGG CCACAACGCT
GGTCACACAC TTGTGATCGA TGGCGAAAAA ACCGTTCTCC ATCTTATTCC ATCAGGGATC
TTACGCGATA ATGTAAAATG CATTATTGGT AACGGTGTGG TGCTTGCACC AGACGCGCTG
ATGACTGAGA TCAAAATGCT TAAAGAGCGT GGAGTTCCTG TTGAGGAGCG TCTACTTATC
TCTGAAGCAT GTCCACTCAT CCTTCCATTC CATTGTGCTC TAGATATTGC TCGTGAAAAA
GCGCGCGGTA ATAATGCTAT CGGTACAACG GGTCGTGGTA TTGGTCCTGC TTATGAAGAC
AAGGTTTCAC GCCGCGGTCT TCGTGTTGGC GATCTGTTTG ATGCAGAGCT GTTTGCAGAG
AAGCTAAAAG AGGTGATGGC TTATCACAAC TTTATGCTGA CTGAATACTA CAAGTGTGAA
GCAGTCGATT ATGAAGAGAC ATTGAAAGAT GCGCTTGCGA TTGCTGACTA CTTGAAGAGC
ATGTGTGTTG ACGTAACTGA GCTTCTTGAT CAGGCGCGTA AAGCTGGTGA GCCAATTCTA
TTTGAAGGTG CTCAAGGTAC ACTGCTTGAT ATCGACCATG GTACTTATCC ATTTGTAACC
TCTTCAAACA CTACCGCAGG TGGTGTTGCG ACAGGTTCTG GATTCGGCCC ACGTCACCTT
GATTATGTTT TGGGTATCAT GAAAGCCTAC ACCACGCGTG TTGGTGCTGG TCCATTCCCA
ACTGAACTTC AATGTGAAAT TGGTGATCAC TTAGGTACTA AAGGTCACGA GTTTGGTGCA
ACTACTGGTC GTAAGCGTCG TCCAGGTTGG TTAGACGTTG TTGCCATGAA GCGTGCAGTA
CAGATCAACA GCATTAGCGG TTTCTGCTTG ACCAAACTAG ATGTGCTAGA TGGTCTTGAA
GAGGTTAAGA TCTGTGTGGG TTACCAATAC CCAGATGGCA GTGTTGCTAC TGTGACTCCA
CTTGCAGCTG AAGGCTACGA GCAGGTTACT CCAGTACTTG AAACTATGCC TGGCTGGAGT
GAGAACACTT TCGGCGCAAC ATCTGTAGAG CAACTGCCAC AAGCAGCGCT AAACTACATC
AAGCGTCTAG AAGAGTTACT TGATACGCCA ATCGATATTA TCTCAACGGG TCCCGACAGA
AACGAGACCA TGATTCTAGT GAATCCGTTT AGTTAA
 
Protein sequence
MGKNVVVLGT QWGDEGKGKI VDLLTEQSKY VVRYQGGHNA GHTLVIDGEK TVLHLIPSGI 
LRDNVKCIIG NGVVLAPDAL MTEIKMLKER GVPVEERLLI SEACPLILPF HCALDIAREK
ARGNNAIGTT GRGIGPAYED KVSRRGLRVG DLFDAELFAE KLKEVMAYHN FMLTEYYKCE
AVDYEETLKD ALAIADYLKS MCVDVTELLD QARKAGEPIL FEGAQGTLLD IDHGTYPFVT
SSNTTAGGVA TGSGFGPRHL DYVLGIMKAY TTRVGAGPFP TELQCEIGDH LGTKGHEFGA
TTGRKRRPGW LDVVAMKRAV QINSISGFCL TKLDVLDGLE EVKICVGYQY PDGSVATVTP
LAAEGYEQVT PVLETMPGWS ENTFGATSVE QLPQAALNYI KRLEELLDTP IDIISTGPDR
NETMILVNPF S