| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4213 |
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| Symbol | |
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| ID | 6118568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5116874 |
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| End bp | 5117623 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635779 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762564 |
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| Protein GI | 170728538 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.195016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000349999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTAGAG CTATCGCAGT ACTATTTTTA ACTTTCCCCA TGACAGCTTG GGCCTTAGTA
CCACCTGATT ATCAAGAGCC GCCAAGCGAC TTCACCGCTG AGATTGAAGC AGGCTTTCAG
CTCAATACAG GTAACACAGA TTCGAGCAGC TTTAACGGTC GCACTAAACT GGTGTACGAC
ACTAAGCAAA CTAAGCAGGA AGCGACCTTT AAAGCGTACT TCGCCTCAGA TGATGAGAAG
ACCACATCCG AGAAGTACGA TATTCAGCTA CAGTCTAACT ACAAGTTACA GAGTGACTGG
GGCGGCTATG TTTTTGGCCG AGGTGACTTC ACCTCTGACA GATTTGGTAG TTACACTCAA
ATATCCACGG TATCGACCGG TTACGGTTTC GATGCCATTT CAGATATCGA TACTAAGCTC
AGCTTAGAGA TAGGCCCAGG TTATCGATAT AATATGCCCA TAGAAACAGA AGCTGAGCCA
GACCCTGAAG CCAATGCCGA TGTGATCATA CGTACCGCAA TAAAGTTCGA GCAGAAACTG
CAAGAGTACA CTAGCTTAAA TGCCGATCTG ACCGCCGAAG CAGGTGAAGA CAACAGTACA
TTAACTCTCG ATATGAACTA CAAGAATACG CTTTTCCAAG ACTGGGCATT TAAGATAGGC
GTTAACGTCA AGTACACAGA TGTAGTGCCA GAGGGCACTA AGCAGACAGA TACCATCACC
ACATTTAACT TACTCTACAC CTTCCAATAA
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| Protein sequence | MFRAIAVLFL TFPMTAWALV PPDYQEPPSD FTAEIEAGFQ LNTGNTDSSS FNGRTKLVYD
TKQTKQEATF KAYFASDDEK TTSEKYDIQL QSNYKLQSDW GGYVFGRGDF TSDRFGSYTQ
ISTVSTGYGF DAISDIDTKL SLEIGPGYRY NMPIETEAEP DPEANADVII RTAIKFEQKL
QEYTSLNADL TAEAGEDNST LTLDMNYKNT LFQDWAFKIG VNVKYTDVVP EGTKQTDTIT
TFNLLYTFQ
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