| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4206 |
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| Symbol | alr |
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| ID | 6118561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5110197 |
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| End bp | 5111273 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641635772 |
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| Product | alanine racemase |
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| Protein accession | YP_001762557 |
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| Protein GI | 170728531 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0248673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000273108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAAACCCT TTCCCCGTGC AGAGATCAGT GCGCAAGCAT TAAAAAATAA CTTATCGCGC
CTTCGCCAAA TTGCGCCCAA TAGCAGTGTT ATGGCGGTGG TAAAGGCGAA TGGTTATGGC
CATGGTTTAC TCAATGTCGC TAGCTGCCTT ACCGAGGCTG ATGGTTTCGG GCTTGCTCGG
CTAGAGGAAG CGTTAGCGTT AAGAGCAGGT GGCGTGAAGG CAAAACTTGT TTTGCTGGAG
GGCTTTTTCA GACAGGTGGA TCTCACTACT TTGGTTGAGC ATGGTATCGA TACCGTTATC
CATAACGAAG TGCAGTTGGA TATGTTGGAA AATGCCTCCC TCTCTAAGCC TGTCACGGTA
TGGTTAAAAT TAGATTCTGG TATGCACAGA CTTGGCTTTA CACCTGAGCA GTTTGCACAG
GTCTACGCAC GCCTTGAAGC GTGTCCTCAA GTGGCCAAAC CTATCAATAT CATGTCTCAC
TTTGCCTGCG CCGATGAACC CGATAATCCG ATGACACAGG AGCAGCTACA GGTTTTTGAG
GCGTTGACAA AAAATTCAAA GGGCTACCGT ACACTGGCAA ACTCTGCCGG CACTCTGTAT
TGGCCTGATA GCCAAGCTGA TTGGATAAGG CCTGGTATTG CGCTTTATGG TGTTTCCCCT
GTTATCGGGG ATCTTGGACG TAATCATGGT TTAGAACCTG CCATGAAGCT TGTGTCTCAG
CTCATTGCGG TCAGAGAACA TAAAGCGGGT CAACCTGTTG GCTATGGCTG CTTTTGGCAT
GCAAAAGCCG ATACTCGACT AGGTGTCGTC GCAATAGGCT ATGGCGACGG CTATCCCCGT
AATGCCCCTG AGGGAACGCC CGTTTGGGTC AATGGCCGCC GCGTTCCTGT TGTGGGGCGA
GTCTCTATGG ATATGTTGAC AGTGGATCTT GGCATCGATG CCAAAGATAG TATTGGTGAT
GATGTCGTCT TATGGGGAAA GGAGTTGCCC GTTGAGGAGG TGGCTGAACA TATTGGCACG
ATTGCCTACG AGTTGGTCAC TAAGCTCACT CCTAGAGTCG CTGTTTGCTT AGACTAG
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| Protein sequence | MKPFPRAEIS AQALKNNLSR LRQIAPNSSV MAVVKANGYG HGLLNVASCL TEADGFGLAR
LEEALALRAG GVKAKLVLLE GFFRQVDLTT LVEHGIDTVI HNEVQLDMLE NASLSKPVTV
WLKLDSGMHR LGFTPEQFAQ VYARLEACPQ VAKPINIMSH FACADEPDNP MTQEQLQVFE
ALTKNSKGYR TLANSAGTLY WPDSQADWIR PGIALYGVSP VIGDLGRNHG LEPAMKLVSQ
LIAVREHKAG QPVGYGCFWH AKADTRLGVV AIGYGDGYPR NAPEGTPVWV NGRRVPVVGR
VSMDMLTVDL GIDAKDSIGD DVVLWGKELP VEEVAEHIGT IAYELVTKLT PRVAVCLD
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