Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4198 |
Symbol | |
ID | 6118553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5104125 |
End bp | 5104601 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635764 |
Product | hypothetical protein |
Protein accession | YP_001762549 |
Protein GI | 170728523 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00896972 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000316349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTTTA ATACATTGAA ACAGATATTC AAACAAGTGT TTAATTTGCT CGTCCTGATG TCAATCTCTT TCTCCTCTCT AGCTAGTGTA ATGTTAGTGG ATGGGCATAT CAGAGCGATG CCACCTAGTG TACCAAACAG CGCAGCTTAC TTTACCTTGA TGAATCATGG CCCAAGCATA AAACTAGTTG GTGTTGAGAC TACTTTTACT GATGAGGCTC AATTACATAC GGTGTTAGAT GAGGATGGCA TGGTTAAGAT GCGTCAGGTA TCTAGCTTTG AGATCCCTAA GCACGGCACG TTAGCCCTAA ATGAGTCTGG TGAACATGTG ATGCTGATGG GGTTGAAGCA GCCGTTGGTT TCCGGTGAAA CTCTTGAGCT AGTTTTAATC TTTGATGATG GTAGTAAACT CCCCATCAAC TTAGTGGTGA GTAAGCAAGG AATGGCTAAA ATGCACAGTC ATGATCATCA CCATTAA
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Protein sequence | MEFNTLKQIF KQVFNLLVLM SISFSSLASV MLVDGHIRAM PPSVPNSAAY FTLMNHGPSI KLVGVETTFT DEAQLHTVLD EDGMVKMRQV SSFEIPKHGT LALNESGEHV MLMGLKQPLV SGETLELVLI FDDGSKLPIN LVVSKQGMAK MHSHDHHH
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