Gene Swoo_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4198 
Symbol 
ID6118553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5104125 
End bp5104601 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content42% 
IMG OID641635764 
Producthypothetical protein 
Protein accessionYP_001762549 
Protein GI170728523 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00896972 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000316349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTTTA ATACATTGAA ACAGATATTC AAACAAGTGT TTAATTTGCT CGTCCTGATG 
TCAATCTCTT TCTCCTCTCT AGCTAGTGTA ATGTTAGTGG ATGGGCATAT CAGAGCGATG
CCACCTAGTG TACCAAACAG CGCAGCTTAC TTTACCTTGA TGAATCATGG CCCAAGCATA
AAACTAGTTG GTGTTGAGAC TACTTTTACT GATGAGGCTC AATTACATAC GGTGTTAGAT
GAGGATGGCA TGGTTAAGAT GCGTCAGGTA TCTAGCTTTG AGATCCCTAA GCACGGCACG
TTAGCCCTAA ATGAGTCTGG TGAACATGTG ATGCTGATGG GGTTGAAGCA GCCGTTGGTT
TCCGGTGAAA CTCTTGAGCT AGTTTTAATC TTTGATGATG GTAGTAAACT CCCCATCAAC
TTAGTGGTGA GTAAGCAAGG AATGGCTAAA ATGCACAGTC ATGATCATCA CCATTAA
 
Protein sequence
MEFNTLKQIF KQVFNLLVLM SISFSSLASV MLVDGHIRAM PPSVPNSAAY FTLMNHGPSI 
KLVGVETTFT DEAQLHTVLD EDGMVKMRQV SSFEIPKHGT LALNESGEHV MLMGLKQPLV
SGETLELVLI FDDGSKLPIN LVVSKQGMAK MHSHDHHH