Gene Swoo_4197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4197 
Symbol 
ID6118552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5103120 
End bp5104091 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content44% 
IMG OID641635763 
Producthypothetical protein 
Protein accessionYP_001762548 
Protein GI170728522 
COG category[S] Function unknown 
COG ID[COG5345] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000155191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000366362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATGA CATGGAAAAA AGGTGCTGGA ATTGCAGTGC TTATATTGTT AATTGGTTAC 
TTTATTAGTG TTTGGTGGAG CATTGAGCCT GATACGATTA AGCCTCAAGA GCTAAGAAGT
CAGAGCAATC ATGAGGTGGT TGGCTATGCA ACAACGACAT CGTTAATTTT GACGATGGAG
ACACTTTTAG GAAAAAGTGG CGGTTGGCTA TCCAATGATG TTTTGCCCCC TTCAATCTTT
ATGGATAATA TGCCGGCGTT TGAGTTTGGT GCGTTAGAGC AAGCCAGAGA TCTTGCACTT
ATTATGCGTA AAGAGTTTAG CCGCTCTCAA TCCCAGTCTG CTGCTGATGC AGACTTGCTT
GCCGCACATT CTAAACTGAA TATTGAGCAC ACCAGCTGGC TTGTTCCTAG TGCAGAAGGT
GAGTATAAAG ATGCGATTAA GCTGCTTAAG GTTTATCGTG CAAAAATTGC CGATGTGAAT
AATCAAGATG CACAGTTTTA TGCCCGTGCA GACAACTTAA ATGAGTGGCT TAAAGAGGTG
CAGAAGCGCC TTGGTAGCAT GTCACAACGA CTATCTGCAA GTGTTGGTCA GGAGCGCTTA
AATACCGATC TTGCTGGTGA CAGCGAGGCG TCGCAATCTA CCCCTAATCT TGCCAGTATG
CAGATTAAAA CAAGTTGGTG GAAAATTGAT GATGTCTTTT ATGAGACTCG TGGTGCCACT
TGGGCTCTGC TGAACTTTAT GAAGGCGATT GAGGTCGATT TCGCTGATGT ACTGCGTAAA
AAGAATGCCG AGGTCAGTTT GCAGCAAATT ATTCGTGAAC TGGAGGAGAC ACAGCAAGCG
GTTTGGAGTC CTATTGTTTT AAATGGTTCT GGATTTGGTG TTGTGGCTAA TCACTCTTTA
GTGATGGCTA ACTATATTTC CCGCGCGAAC GCTGCGGTGA TTGATCTAAC TAACTTATTA
ACTAAAGGTT AA
 
Protein sequence
MQMTWKKGAG IAVLILLIGY FISVWWSIEP DTIKPQELRS QSNHEVVGYA TTTSLILTME 
TLLGKSGGWL SNDVLPPSIF MDNMPAFEFG ALEQARDLAL IMRKEFSRSQ SQSAADADLL
AAHSKLNIEH TSWLVPSAEG EYKDAIKLLK VYRAKIADVN NQDAQFYARA DNLNEWLKEV
QKRLGSMSQR LSASVGQERL NTDLAGDSEA SQSTPNLASM QIKTSWWKID DVFYETRGAT
WALLNFMKAI EVDFADVLRK KNAEVSLQQI IRELEETQQA VWSPIVLNGS GFGVVANHSL
VMANYISRAN AAVIDLTNLL TKG