Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4197 |
Symbol | |
ID | 6118552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5103120 |
End bp | 5104091 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635763 |
Product | hypothetical protein |
Protein accession | YP_001762548 |
Protein GI | 170728522 |
COG category | [S] Function unknown |
COG ID | [COG5345] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000155191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000366362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGATGA CATGGAAAAA AGGTGCTGGA ATTGCAGTGC TTATATTGTT AATTGGTTAC TTTATTAGTG TTTGGTGGAG CATTGAGCCT GATACGATTA AGCCTCAAGA GCTAAGAAGT CAGAGCAATC ATGAGGTGGT TGGCTATGCA ACAACGACAT CGTTAATTTT GACGATGGAG ACACTTTTAG GAAAAAGTGG CGGTTGGCTA TCCAATGATG TTTTGCCCCC TTCAATCTTT ATGGATAATA TGCCGGCGTT TGAGTTTGGT GCGTTAGAGC AAGCCAGAGA TCTTGCACTT ATTATGCGTA AAGAGTTTAG CCGCTCTCAA TCCCAGTCTG CTGCTGATGC AGACTTGCTT GCCGCACATT CTAAACTGAA TATTGAGCAC ACCAGCTGGC TTGTTCCTAG TGCAGAAGGT GAGTATAAAG ATGCGATTAA GCTGCTTAAG GTTTATCGTG CAAAAATTGC CGATGTGAAT AATCAAGATG CACAGTTTTA TGCCCGTGCA GACAACTTAA ATGAGTGGCT TAAAGAGGTG CAGAAGCGCC TTGGTAGCAT GTCACAACGA CTATCTGCAA GTGTTGGTCA GGAGCGCTTA AATACCGATC TTGCTGGTGA CAGCGAGGCG TCGCAATCTA CCCCTAATCT TGCCAGTATG CAGATTAAAA CAAGTTGGTG GAAAATTGAT GATGTCTTTT ATGAGACTCG TGGTGCCACT TGGGCTCTGC TGAACTTTAT GAAGGCGATT GAGGTCGATT TCGCTGATGT ACTGCGTAAA AAGAATGCCG AGGTCAGTTT GCAGCAAATT ATTCGTGAAC TGGAGGAGAC ACAGCAAGCG GTTTGGAGTC CTATTGTTTT AAATGGTTCT GGATTTGGTG TTGTGGCTAA TCACTCTTTA GTGATGGCTA ACTATATTTC CCGCGCGAAC GCTGCGGTGA TTGATCTAAC TAACTTATTA ACTAAAGGTT AA
|
Protein sequence | MQMTWKKGAG IAVLILLIGY FISVWWSIEP DTIKPQELRS QSNHEVVGYA TTTSLILTME TLLGKSGGWL SNDVLPPSIF MDNMPAFEFG ALEQARDLAL IMRKEFSRSQ SQSAADADLL AAHSKLNIEH TSWLVPSAEG EYKDAIKLLK VYRAKIADVN NQDAQFYARA DNLNEWLKEV QKRLGSMSQR LSASVGQERL NTDLAGDSEA SQSTPNLASM QIKTSWWKID DVFYETRGAT WALLNFMKAI EVDFADVLRK KNAEVSLQQI IRELEETQQA VWSPIVLNGS GFGVVANHSL VMANYISRAN AAVIDLTNLL TKG
|
| |