Gene Swoo_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4192 
Symbol 
ID6118547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5098663 
End bp5099502 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content45% 
IMG OID641635758 
Productcalcineurin phosphoesterase domain-containing protein 
Protein accessionYP_001762543 
Protein GI170728517 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00404354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTAGAAG AGGCTATCTC TTATTCCATT GATGTTGAAG CTAGCGTGAA GATCGTACAA 
GTTACGGATC CACATCTGTT TGCCGATCAC GATGCACAGC TATTAGGTGT CAATACAGCC
CAGAGTTTGC GTGCGGTTCT GAATACGATT GATGCTGTTC ACTATCCAGC GGATTTTATG
TTGGCATCTG GCGATATTAG TCAAGATTAC TCAGCTGAGT CATATCATAA CTTTGTTAAA
GCGATCTCTC CTCTCGGCCT ACCTTGCCAT TACTTACCTG GAAATCATGA TGACCCTAGG
ATCATGCGAT TGAATATGCA GGGGCCTAAG ATTTTTGGTC ATAGACGTAT TTTGGTCGGC
AGCTGGCAGG TTATCATGTT GGACTCAACT GTTCGTGGTA AGCCTGGTGG TTACATGTCT
GATGCGGAGT TTGAGCTTAT TAAAGCGGCC GCTGAGGATC AACCAGATCG TCATATCTTA
CTTGCTATGC ATCATAATCC TATTTTAGTG GGCTGTGCTT GGCTGGATCA GCACTGGATG
AGTAACGGCA GTGAGTTTCT TGAATTGGTT GCTAAGATCC CGCAAGTTAA AGGTCTGCTA
TGGGGGCATG TACACCAACA GATAGATCAA GAGTATTCTG GGCACCACGG CCCGATAAAG
TTGATGGCTA CGCCCTCAAC TTGCATTCAG TTCAAACCTA AATCTTCCTA TTTTGCATTG
GATGCCGTTC AGCCAGGCTA TCGTCTGCTT GAGCTTAAAG CCGATGGCAA TATCTTAACG
AATGTATACC GAGTTCCTGG TGAGCTTTTC TCTCCGGATA AAAGTGCTAG CGGGTATTAG
 
Protein sequence
MLEEAISYSI DVEASVKIVQ VTDPHLFADH DAQLLGVNTA QSLRAVLNTI DAVHYPADFM 
LASGDISQDY SAESYHNFVK AISPLGLPCH YLPGNHDDPR IMRLNMQGPK IFGHRRILVG
SWQVIMLDST VRGKPGGYMS DAEFELIKAA AEDQPDRHIL LAMHHNPILV GCAWLDQHWM
SNGSEFLELV AKIPQVKGLL WGHVHQQIDQ EYSGHHGPIK LMATPSTCIQ FKPKSSYFAL
DAVQPGYRLL ELKADGNILT NVYRVPGELF SPDKSASGY