| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4191 |
|---|
| Symbol | |
|---|
| ID | 6118546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5097844 |
|---|
| End bp | 5098422 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641635757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762542 |
|---|
| Protein GI | 170728516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3150] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0496837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTT ATATCCATGG GTTTAATAGC TCCCCTCTAT CGGAAAAGGG GATAGTGACA
GCCCAGTTTA TGGCTGAATT TTACCCTGAT ATTACTTTCC ATCAGCCTCA ACTACCTCCA
GACCCAACTG ATGGCGTGAC ACTGTTATCA TCGATCGTAG AGTCAGCATT AGCGCAAGGT
GAGACGCTGA ATTTTATTGG CTCATCTCTT GGTGGTTACT ATGCCAGTTA CTTAGTTGAG
AAATATGGTG GCCGAGCAGT ACTGATTAAT CCAGCAGTAA AACCGTTTGA ACTGTTTGAT
GAATTTATAG GGTCTCAATA TAACCCCTAT ACAGACGAGC ATTATCAAGT GGTTGCGCAG
CATAAAGATG ATGTAAAAGC GTTTAATACA GAGGCTATTT TAAATCCTGA TCGATTTTTA
GTCCTACTGC AATCGGGTGA CGAAGTCCTC GATTATCGAC AAGCCGTTCA GAAATATCAC
TGTTGCCAAT TACTACTTGA GGCTGGCGGT GACCATAGCT TTGTTGGCTA TGATAAGAAG
TTGAAAAGGA TCTGTCAGTT TCTGTTTCTT GACAAATAA
|
|---|
| Protein sequence | MLLYIHGFNS SPLSEKGIVT AQFMAEFYPD ITFHQPQLPP DPTDGVTLLS SIVESALAQG
ETLNFIGSSL GGYYASYLVE KYGGRAVLIN PAVKPFELFD EFIGSQYNPY TDEHYQVVAQ
HKDDVKAFNT EAILNPDRFL VLLQSGDEVL DYRQAVQKYH CCQLLLEAGG DHSFVGYDKK
LKRICQFLFL DK
|
|---|
| |