| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4190 |
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| Symbol | |
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| ID | 6118545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5095909 |
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| End bp | 5097804 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635756 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001762541 |
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| Protein GI | 170728515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.218544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCCA TGACAAATCA ATATACCTCT GATGCAATTG AAGTCCTTAA TGGACTGGAT
CCTGTAAAAC GCCGCCCTGG TATGTATACC GACACCACGC GTCCGAACCA TTTAGGACAA
GAGGTTATTG ATAACAGTGT CGATGAAGCT CTGGCGGGGC ATGCAACTAA AATTGATGTT
ATTTTGCATA AAGATAACTC TCTTGAAGTT ATCGATGATG GCCGTGGTAT GCCGATCGAT
ATCCACCCTG AAGAGGGGAT CCCTGGTGTC GAACTTATCT TAACCAAACT TCATGCTGGC
GGTAAGTTCT CTAACGACAA CTATCAGTTT TCAGGTGGTT TACACGGTGT AGGTATCTCA
GTCGTTAACG CTTTATCTAA CCGAGTAGAG ATAACTGTAC GCCGAAATGG CCTTGTTTAT
GATATGGCTT TTGAGCATGG TGATAAGGTT GAAGATCTAA CTGAGACTGG CACTTGTGGT
CGACGTAATA CAGGTACTCG AGTGCATTTT TGGCCAACCC CTAGCTATTT CGACTCCGCT
AATTTCTCCA TTCCCAAGCT GACCTACCTG TTAAGAGCAA AGGCTGTCTT ATGCCCTGGG
CTTAAGATTA AGTTTGTCAA TAAACAGACC GATGAGACAA CAGAATGGCA CTATGAAAGT
GGCCTGACCG ATTACCTTAT CTCCTCGGTA AAAGACTCCT TGATGCTACC TGAAGATCCT
TTTGTGGGCT CGATGAAGGG AAATCAAGAG GCGGTTGATT GGGCTATTAC TTGGTTACCA
GAGGGCGGGG ATTACCTTAA TGAAAGTTAT GTTAACCTGA TCCCTACGCC TCTAGGTGGC
ACCCATGTTA ACGGTTTCAG GCAGGGCTTA TTGGACTCGA TGCGTGAGTT TTGTGAGTTT
CGCAACCTTA TTCCCAGAGG AATAAAGTTA ACCCCAGAAG ATATCTGGGA TCGTAGTAGC
TTTATCTTGT CGGTGAAGAT GCAAGATCCT CAATTTGCAG GTCAAACTAA AGAGAAGCTT
TCAAGCCGTC AAAGTGCGGC ATTTGTATCG GGTATCGTAA GAGATGCCTT TAGTTTGTGG
CTCAATACCC ATACAGACCA AGCAGCAGCC CTCGCTGAGA TGTGTATTAA CAACGCACAG
AAGCGTTTAA AGTCTGCTAA AAAGGTTGCG CGAAAGAAGG TGACATCTGG TCCTGCACTA
CCGGGTAAAT TAACTGATTG TAGTGGCCAA GACCCAATGC GTGGGGAGCT CTTCCTTGTG
GAAGGAGACT CTGCTGGCGG AAGTGCAAAA CAGGCGCGAG ATCGTGAATT TCAGGCAATT
ATGCCCCTTC GTGGTAAGAT CTTAAACACG TGGGAGGTGG ATGCAAGCCA AGTGTTAGCG
TCGCAAGAGG TTCATGATAT CTCTGTGGCA ATAGGCTGCG ATCCAGATTG TGAAGATATT
TCCGAGCTTA GATACGGTAA AATATGTATA TTAGCGGATG CTGATTCTGA TGGGCTGCAT
ATTGCGACCT TGCTGTGCGC ACTGTTTATG AAGCATTATA AGGTGTTGGT TGAGCATGGC
CATGTTTATG TTGCTATGCC GCCACTGTTC CGTGTTGATG TAGGTAAAGA GGTTTTTTAC
GCGCTGGATG AGGCGGAAAA AGATGGCATT TTAGACCGGA TCACGGCTGA AAAGAAGAAA
GGCAAAGTGC AGGTTACCCG ATTTAAAGGA CTAGGTGAGA TGAATCCTCT TCAGTTAAGA
GAGACCACCA TGGATCCTAA TACCCGTAGA CTCGTTCAGT TAACGATTGA TGATGTAGAA
GATACAATGG CAGTAATGGA TATGCTGCTT GCTAAGAAGC GTTCTGGAGA TAGAAAAACC
TGGTTAGAAA CTAAGGGTGA TCTGGCAGAC TTTTAG
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| Protein sequence | MCAMTNQYTS DAIEVLNGLD PVKRRPGMYT DTTRPNHLGQ EVIDNSVDEA LAGHATKIDV
ILHKDNSLEV IDDGRGMPID IHPEEGIPGV ELILTKLHAG GKFSNDNYQF SGGLHGVGIS
VVNALSNRVE ITVRRNGLVY DMAFEHGDKV EDLTETGTCG RRNTGTRVHF WPTPSYFDSA
NFSIPKLTYL LRAKAVLCPG LKIKFVNKQT DETTEWHYES GLTDYLISSV KDSLMLPEDP
FVGSMKGNQE AVDWAITWLP EGGDYLNESY VNLIPTPLGG THVNGFRQGL LDSMREFCEF
RNLIPRGIKL TPEDIWDRSS FILSVKMQDP QFAGQTKEKL SSRQSAAFVS GIVRDAFSLW
LNTHTDQAAA LAEMCINNAQ KRLKSAKKVA RKKVTSGPAL PGKLTDCSGQ DPMRGELFLV
EGDSAGGSAK QARDREFQAI MPLRGKILNT WEVDASQVLA SQEVHDISVA IGCDPDCEDI
SELRYGKICI LADADSDGLH IATLLCALFM KHYKVLVEHG HVYVAMPPLF RVDVGKEVFY
ALDEAEKDGI LDRITAEKKK GKVQVTRFKG LGEMNPLQLR ETTMDPNTRR LVQLTIDDVE
DTMAVMDMLL AKKRSGDRKT WLETKGDLAD F
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