| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4189 |
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| Symbol | |
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| ID | 6118544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5094697 |
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| End bp | 5095818 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635755 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_001762540 |
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| Protein GI | 170728514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.397112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGGG CTTGTATCTC AGGGCTTTTT AGCTTTTCGG TACAAGCCGC TTCGCAGCCT
AAAATGATTA CGGTATCTAA AGGCTTTGGT CTCACTCTCT ATGCATCGGA TTTGGGTGAT
GCTAAACAGA TGGCGTTAGG CGATAAAGGT ACACTGTTTG TTGGGTCCCA TAGAAAAGGG
ACCATACTTG CGCTAGTTGA TAGTAATCAA GATGGCCGGG TTGATAAACG TTATGTGGTA
GCAAAAGGCT TAGATAATCC CGAAGCGATC GCATTTTATA ATGGTGATCT TTATGCTGCA
GTAGACGAAC GGATCATACG TTTTAAAGAT ATTGAAAATC GTTTGAGACG GCCAGGGCGT
GGCAAAGAGG TATATGACCG CTTGCCAGGT AAGACAAACA AGAGCCATAG AGCGTTAAAT
TTTGGGCCTG ACGGGCGTTT GTATGTCTCT ATAGGTGCGC CTTGTAACGT CTGTGAAGCA
GAAGACCCCT TTGGTAGTAT TATTGCTATC GATATAGAAA CTGGTAGCAG TGAACAGATA
GCTTCTGGGA TCCGTAACGT CACTGGTTTT GATTGGTCTC CTCAAGATCA AAGCTTATGG
TTCGCCGATC TCGGCAGAGA TTGGATGGGA GACAGGCTAC CGCCTGATGA GATTAACCGT
GTTGAAACTG TAGGTGGCCA TTATGGCTTC CCCTATCTAC ACGCAAAATC TGTACTTGAA
CCTGCCTATG AGAAACCTAA GAACCTAAAG ATCACTTTAC CTAATTATGA GCTGCCTGCT
CATGTCGCTC CAATGGGGTT ACATTTTTAC CGCGGCGAGC AGTTCCCGCC TAGATATCAT
AATCAGATGT TTGTAGCGGA AAATGGTTCT TGGAACCGAT CCAGTAAAAT TGGCTATCAA
GTCGTGATGC TGGAAATTGA GAACAATAAA GTCATCAAAC GAAGTCCAGT TGTTAGCTTT
TTAGATGGAG AGTTTCCAGT CGCCAGGCCT TACTCGGTAT TAACCGCCCC TGATGGCGCT
ATGTATATTT CAGATGATCT GAAAGGCAAC ATCTATCGTT TGTATTATAA AGAAACTATC
AATGAAAAGA GTGAACCTGA GCCAGAACAG GATAATGAAT AA
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| Protein sequence | MFWACISGLF SFSVQAASQP KMITVSKGFG LTLYASDLGD AKQMALGDKG TLFVGSHRKG
TILALVDSNQ DGRVDKRYVV AKGLDNPEAI AFYNGDLYAA VDERIIRFKD IENRLRRPGR
GKEVYDRLPG KTNKSHRALN FGPDGRLYVS IGAPCNVCEA EDPFGSIIAI DIETGSSEQI
ASGIRNVTGF DWSPQDQSLW FADLGRDWMG DRLPPDEINR VETVGGHYGF PYLHAKSVLE
PAYEKPKNLK ITLPNYELPA HVAPMGLHFY RGEQFPPRYH NQMFVAENGS WNRSSKIGYQ
VVMLEIENNK VIKRSPVVSF LDGEFPVARP YSVLTAPDGA MYISDDLKGN IYRLYYKETI
NEKSEPEPEQ DNE
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