| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4188 |
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| Symbol | |
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| ID | 6118543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5092421 |
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| End bp | 5094697 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635754 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001762539 |
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| Protein GI | 170728513 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.702459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATG CGATAGATTT AAGTCTTGAT GGCGTTGAGC AGATGCCGAT GCGCCGCTTC
ACGGAAGATG CATACCTAAA CTACTCCATG TACGTCATCA TGGATCGAGC TTTACCCCAT
ATTGGTGATG GCCTTAAGCC AGTTCAACGT CGAATAATCT ATGCAATGAG TGAGTTAGGA
TTAACTTCAC AGTCAAAGCA TAAGAAGTCA GCTCGTACCG TTGGTGATGT ATTGGGTAAA
TATCATCCCC ACGGTGATAG CGCCTGTTAT GAAGCTATGG TGTTGATGGC ACAGCCATTC
TCCTATCGTT ATCCTTTAGT TGATGGTCAA GGTAACTGGG GGGCGCCAGA TGATCCTAAG
TCTTTCGCTG CAATGCGTTA TACCGAAGCT CGCTTATCTA AGTTTTCCGA GGTATTACTC
AGCGAGTTAG GTCAGGGGAC GGTCGATTGG GGCGTGAATT TCGACGGTAC CATGAAGGAA
CCTTTAGTCC TTCCATCTCG TTTACCCCAT ATTTTGCTCA ACGGTATTAC CGGTATTGCT
GTAGGCATGG CAACCGATGT ACCGCCTCAT AACACACGAG AGCTCGTGTC TGCTTGTATT
GAGCTTTTGG ATAACCCCAA AGCCGAGCTT GCTGAGATTA TGGAGCATGT TCCTGGGCCA
GATTACCCAA CTGAAGCTGA GATCATCACA CCTGCTGCTG ATATTGTTAA GATCTATACC
ACTGGTCGCG GCTCGATAAA GGCCCGTGCG GTTTATGCGG TTGAGAATGG CGAGATTGTG
ATCACAGCGC TTCCACATCA AGCCAGTGGC GGAAAGATAT TAGAGCAGAT TGCAGCTCAA
ATGCAGGCTA AAAAGCTTCC TATGGTTGTT GACCTTAGGG ATGAGTCTGA TCATGAGAGC
CCAGTTCGTA TCGTCATCGT TCCTCGCTCT AATCGTATAG ATTGCGATCA AGTGATGGCT
CACCTGTTTG CAACTACAGA TCTTGAGAAG TCTTTTCGGG TTAACCTGAA TATTCTTGGT
TTAAACGGCC GCCCCCAAGT TAAGGGGCTA CTGCAGATAT TGAATGAATG GTTGGAGTAC
CGTTTCCAAA CGGTTACTCG CCGAGTTCAA TACCGACTTG ATAAAATACT CGCAAGATTA
CATATTCTTG ATGCGTTAAT GATTGCATTT TTGAATATTG ATGAAGTGAT TGAGATCATC
CGTTATGAGG AAGATCCCAA AGCTGAATTG ATGTCGCGCT ATAACTTATC TGATAAGCAA
GCCGACGCCA TTTTGGATCT TAAACTACGT CATTTAGCCA AGCTAGAAGA GTTTAAGATT
AAAACTGAGC AGAGTGAACT TGAAGCTGAA CGTGATAAGT TACAGCTACT GCTAAGCTCT
GACAGAAGAA TGAAGACTTT GATTAAGAAA GAGTTGAAGC AAGATGCTGA AACTTATGGT
GATGATAGAC GTTCACCCTT AATTGAGCGA AGTGAGTCCA AAGCGTTAAC TGAGCATGAA
CTTGCACCTG TTGAGGCTGT TACCGTCGTT CTGTCTGAGA AGGGCTGGGT TCGCTGTGCT
AAGGGGCATG ATATAGACGC TAAAGCCTTG TCCTATAAAG CGGGTGATAG CTTCCTGTGT
TCAGCCACCG GTCGGAGTAA TCAACCGAGT GTCTTTATTG GCTCCACTGG TCGTGCATTT
GCAACTGAAA CACATACCTT GCCATCGGCT AGAAGTCAGG GAGAGCCAAT TACAACGCGA
TTTAATCTCT CTCCTGGTGA GATCATGGAG CATGTGCTGC TGGGCGATGA AGATAAATAT
TACCTATTGG CTTCTGATGC TGGTTATGGT TTTGTCGGCT CCTACAAAGA TATGATCTCA
AGGAATAAAG CTGGTAAGGC ACTATTGACC TTACCTGCTA ATTCGAAAGT GATCTCTCCT
AAGCTGGTTG ATAGGTCAAG ACCTGAGTCT ATTCTGGCTA TTACCAACGA AGGGCGAATG
TTGCTGTTTT CTATGGAAGC ACTGCCACAG CTATCTAAAG GTAAAGGCAA TAAGATTATC
GGCATTCCTG GTGAGCGTGC TAAAGCGCGT GAGGAGCTCT TAATTCATCT TTATGTTGTA
CCAGAAGATA CCAGTGTGAC TCTTTGGGCC GGTAAGCGAA AGCTCACCCT TAAGCCGAGC
GATCTTGAAC ACTATAGAGG TGAACGAGGC AGACGTGGTG CTAAGCTTCC AAGAGGGTTA
CAGCGTGTTG ATAGTGTGGA GCTCGGTGAA GGGACACAAC AAGCTATAAC AGAATAG
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| Protein sequence | MSDAIDLSLD GVEQMPMRRF TEDAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LTSQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVDW GVNFDGTMKE PLVLPSRLPH ILLNGITGIA
VGMATDVPPH NTRELVSACI ELLDNPKAEL AEIMEHVPGP DYPTEAEIIT PAADIVKIYT
TGRGSIKARA VYAVENGEIV ITALPHQASG GKILEQIAAQ MQAKKLPMVV DLRDESDHES
PVRIVIVPRS NRIDCDQVMA HLFATTDLEK SFRVNLNILG LNGRPQVKGL LQILNEWLEY
RFQTVTRRVQ YRLDKILARL HILDALMIAF LNIDEVIEII RYEEDPKAEL MSRYNLSDKQ
ADAILDLKLR HLAKLEEFKI KTEQSELEAE RDKLQLLLSS DRRMKTLIKK ELKQDAETYG
DDRRSPLIER SESKALTEHE LAPVEAVTVV LSEKGWVRCA KGHDIDAKAL SYKAGDSFLC
SATGRSNQPS VFIGSTGRAF ATETHTLPSA RSQGEPITTR FNLSPGEIME HVLLGDEDKY
YLLASDAGYG FVGSYKDMIS RNKAGKALLT LPANSKVISP KLVDRSRPES ILAITNEGRM
LLFSMEALPQ LSKGKGNKII GIPGERAKAR EELLIHLYVV PEDTSVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGE GTQQAITE
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