| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4185 |
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| Symbol | |
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| ID | 6118540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5089173 |
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| End bp | 5090099 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635751 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001762536 |
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| Protein GI | 170728510 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACACA AGTTACTATT ACTAACCAGT AAAAATGAAC GTTATAGGGA GTTGCTTGCT
TCTTGCCACC TTCCTGAGAT CGTTTTACTT GGTGACGAAC CTAGTAGCAT TTTAGAGGCT
AATGTTTGGC TGGCAGAACC AGCATTGGCA GCCCCCCTAC TTCCTCATGC TAACAATTTA
ACTTGGATGC AATCGACCAT GGCTGGAGTC GATGCCCTAG TCAAACCTCG CCAACGAAAA
GATTATCAAC TCACAAATGT TAGAGGCATA TTTGGCCCAT TAATGAGTGA ATACCTTTTT
GGATACCTGT TAGCCCACCA ACGTGAACAT CAAAAATATA AAACCCAGCA AGCTGAAAAA
ATCTGGCTTC CTGGCAGTTT TAAAACACTG CAAGGTCAAA ACCTACTACT TTTAGGGACA
GGAAATATAG CAAAACACTT GGCTCAAACA GCAAAACACT TTGGTATGCA TGTCACAGGG
ATAAACCGCG GCGCTAAGCC AACCAAAGGG TTTGATAAAG TTGATACGCT AGCCAATATC
TCACAACACC TTGCACAAGC AGATGCCGTC GCCAGCATCT TACCTAGTAC CCCTCAAACA
AGAGGGGCTC TCAATGCTGA GCTGCTCTCT ATGATGAAAC CTGGCGCTAT CTTTTTTAAC
TTAGGCCGTG GTGACGTGCT AGATCTAGAC GCCCTCTACA TGCAGTTAAT AGAGAACAGT
GACCAACATG CTATTTTAGA TGTGTTCAAT CAGGAGCCTT TACCAAAAGA GCACCCCATC
TGGACACTGG ATAATGTGAT TATTACCCCC CATATTGCCG CACCTAGTTT TCCAGAGCAG
GTAGTTGAGA TATTTTCAAA TAACTACCAC AAACTGCTTC AGGGAGAGCA GCTCACTCAT
GCAGTAAACT TTGCTCGAGG CTATTAA
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| Protein sequence | MRHKLLLLTS KNERYRELLA SCHLPEIVLL GDEPSSILEA NVWLAEPALA APLLPHANNL
TWMQSTMAGV DALVKPRQRK DYQLTNVRGI FGPLMSEYLF GYLLAHQREH QKYKTQQAEK
IWLPGSFKTL QGQNLLLLGT GNIAKHLAQT AKHFGMHVTG INRGAKPTKG FDKVDTLANI
SQHLAQADAV ASILPSTPQT RGALNAELLS MMKPGAIFFN LGRGDVLDLD ALYMQLIENS
DQHAILDVFN QEPLPKEHPI WTLDNVIITP HIAAPSFPEQ VVEIFSNNYH KLLQGEQLTH
AVNFARGY
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